search for: mypap

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2007 Aug 21
4
Formatting Sweave in R-News
Hi, I am editing a document for submission to the R-news newsletter, and in my article my Sweave code inserts a dynamically generated PDF report that my R program generates. However, when I insert the PDF using the following Sweave code: \newpage \includegraphics[scale=1.0]{\Sexpr{print(location)}} \newpage (in tex this looks like): \newpage \includegraphics[scale=1.0]{/home/arjun/sample.pdf}
2009 Jan 27
2
using Sweave with a master file that has several iputted .tex files
Suppose I have a Master.Rnw file that looks something like this: \documentclass[12pt]{mypaper} \usepackage[margin=1in]{geometry} \usepackage{setspace} \usepackage{url} \usepackage{indentfirst} \usepackage{fancyhdr} \usepackage{Sweave} \pagestyle{fancy} \lhead{sonographic rectal diameter and ADHD} \rhead{ } \usepackage{abbrevs} %\usepackage{natbib} %\usepackage{apacite} \bibliographystyle{...
2009 Apr 13
2
I want to use Sweave, but only sometimes
Does anybody have a workable system to run an Rnw document through R-Sweave when necessary, but to just run it through LaTeX if no new R calculations are needed? I.e., the figures already exist, I do not need R to do more work for me, so I send the document straight to LaTeX. I want to leave open the option that I might need to run the document through Sweave in the future, so I don't want
2010 Aug 08
1
p.adjust( , fdr)
Hello, I am not sure about the p.adjust( , fdr). How do these adjusted p-values get? I have read papers of BH method. For independent case, we compare the ordered p-values with the alfa*i/m, where m is the number of tests. But I have checked that result based on the adjusted p-values is different with that by using the independent case method. Then how do the result of p.adjust( , fdr) come? And
2011 Sep 30
1
Hi
Hi, There is a question that I am confused. I have a set of data like this: hsa-miR-205--GATA3 0.797882767 1.08E-13 hsa-miR-205--ITGB4 0.750217593 1.85E-11 hsa-miR-187--PGF 0.797604155 3.24E-11 hsa-miR-205--SERPINB5 0.744124886 3.28E-11 hsa-miR-205--PBX1 0.734487224 7.89E-11 hsa-miR-205--MCC 0.72499934 1.80E-10 hsa-miR-205--WNT5B 0.717705259 3.33E-10 hsa-miR-200c--PKN2 0.721746815