Displaying 2 results from an estimated 2 matches for "myheatmap".
2004 Dec 04
1
Wishlist: heatmap/image legend (PR#7402)
.../or image had the option of printing a legend
bar on it somewhere that would indicate the ranges given by the colors in the
heatmap (i.e. a very small image rectangle with the same colors as in the
heatmap). Because heatmap is using layout, it seems pretty complicated to add
yourself--I make my own myheatmap command.
A lesser wish, along the same line, would be that with the optional side bar
colors you could put a legend in the plot somehow. Again, I find it difficult to
do without making your own myheatmap command and modifying the layout. And this
seems easy to do spacewise, because there's a...
2004 Jan 04
5
Analyzing dendograms??
I have used heatmap to visualize my microarray data. I have a matrix of
M-values. I do the following.
#The distance between the columns.
sampdist <- dist(t(matrix[,]), method="euclidean")
sclus <- hclust(sampdist, method="average")
#The distance between the rows.
genedist <- dist(matrix[,], method="euclidean")
gclus <- hclust(genedist,