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2011 Apr 16
0
Problem using package 'cgdsr' behind http proxy
...itory. Prior to starting R, the environment variable "HTTP_PROXY" is set via export HTTP_PROXY="username:password at server:port" Within R Sys.getenv("HTTP_PROXY") prints the correct variable. After successful loading the cgdsr-library, a URL handler is set with mycgds=CGDS("http://cbio.mskcc.org/cgds-public/") but when executing the test test(mycgds) it returns an error stating, that it could not connect to the URL above on port 80. Thus I deduce, that the HTTP proxy settings are not used by the CGDSR package. As I could not find a anything relate...