Displaying 4 results from an estimated 4 matches for "msigdb".
2015 May 14
1
Creating a vignette which depends on a non-distributable file
...allowed to
>> distribute, but which the user can easily download manually. Moreover, it
>> is not possible to download this file automatically from R: downloading
>> requires a (free) registration that seems to work only through a browser.
>> (I'm talking here about the MSigDB from the Broad Institute,
>> http://www.broadinstitute.org/gsea/msigdb/index.jsp).
>>
>> In the vignette, I tell the user to download the file and then show how it
>> can be parsed and used in R. Thus, I can compile the vignette only if this
>> file is present in the v...
2015 May 14
2
Creating a vignette which depends on a non-distributable file
...that requires a file which I am not allowed to
distribute, but which the user can easily download manually. Moreover, it
is not possible to download this file automatically from R: downloading
requires a (free) registration that seems to work only through a browser.
(I'm talking here about the MSigDB from the Broad Institute,
http://www.broadinstitute.org/gsea/msigdb/index.jsp).
In the vignette, I tell the user to download the file and then show how it
can be parsed and used in R. Thus, I can compile the vignette only if this
file is present in the vignettes/ directory of the package. However,...
2015 May 14
0
Creating a vignette which depends on a non-distributable file
...e which I am not allowed to
> distribute, but which the user can easily download manually. Moreover, it
> is not possible to download this file automatically from R: downloading
> requires a (free) registration that seems to work only through a browser.
> (I'm talking here about the MSigDB from the Broad Institute,
> http://www.broadinstitute.org/gsea/msigdb/index.jsp).
>
> In the vignette, I tell the user to download the file and then show how it
> can be parsed and used in R. Thus, I can compile the vignette only if this
> file is present in the vignettes/ directory...
2009 Sep 27
3
CRAN (and crantastic) updates this week
CRAN (and crantastic) updates this week
New packages
------------
* bdoc (1.0)
Michael Anderson
http://crantastic.org/packages/bdoc
This package contains a function that will classify DNA barcodes as
well as a few test and reference data sets.
* bdsmatrix (1.0)
Terry Therneau
http://crantastic.org/packages/bdsmatrix
This is a special case of sparse matrices, used by coxme and