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2023 Jul 08
1
Getting an error calling MASS::boxcox in a function
....g.,
adding a start of 1 to the data), the following works for me:
------ snip ------
> library(MASS)
> BoxCoxLambda <- function(z){
+ b <- boxcox(z + 1 ~ 1,
+ lambda = seq(-5, 5, length.out = 101),
+ plotit = FALSE)
+ b$x[which.max(b$y)]
+ }
> mrow <- 500
> mcol <- 2
> set.seed(12345)
> dd <- matrix(rgamma(mrow*mcol, shape = 2, scale = 5), nrow = mrow, ncol =
+ mcol)
> dd1 <- dd[, 1] # 1st column of dd
> res <- boxcox(lm(dd1 + 1 ~ 1), lambda = seq(-5, 5, length.out = 101),
plotit
+...
2023 Jul 08
1
Getting an error calling MASS::boxcox in a function
...(MASS)
>>
>> # Find optimised Lambda for Boc-Cox transformation
>> BoxCoxLambda <- function(z){
>> b <- boxcox(lm(z+1 ~ 1), lambda = seq(-5, 5, length.out = 61), plotit
>> = FALSE)
>> b$x[which.max(b$y)] # best lambda
>> }
>>
>> mrow <- 500
>> mcol <- 2
>> set.seed(12345)
>> dd <- matrix(rgamma(mrow*mcol, shape = 2, scale = 5), nrow = mrow, ncol =
>> mcol)
>>
>> # Try it not using the BoxCoxLambda function:
>> dd1 <- dd[,1] # 1st column of dd
>> bb <- boxcox(lm(dd1+...
2023 Jul 08
1
Getting an error calling MASS::boxcox in a function
...or me:
>
> ------ snip ------
>
> > library(MASS)
>
> > BoxCoxLambda <- function(z){
> + b <- boxcox(z + 1 ~ 1,
> + lambda = seq(-5, 5, length.out = 101),
> + plotit = FALSE)
> + b$x[which.max(b$y)]
> + }
>
> > mrow <- 500
> > mcol <- 2
> > set.seed(12345)
> > dd <- matrix(rgamma(mrow*mcol, shape = 2, scale = 5), nrow = mrow, ncol =
> + mcol)
>
> > dd1 <- dd[, 1] # 1st column of dd
> > res <- boxcox(lm(dd1 + 1 ~ 1), lambda = seq(-5, 5, leng...
2023 Jul 08
1
Getting an error calling MASS::boxcox in a function
...t;> > library(MASS)
>>
>> > BoxCoxLambda <- function(z){
>> + b <- boxcox(z + 1 ~ 1,
>> + lambda = seq(-5, 5, length.out = 101),
>> + plotit = FALSE)
>> + b$x[which.max(b$y)]
>> + }
>>
>> > mrow <- 500
>> > mcol <- 2
>> > set.seed(12345)
>> > dd <- matrix(rgamma(mrow*mcol, shape = 2, scale = 5), nrow = mrow, ncol =
>> + mcol)
>>
>> > dd1 <- dd[, 1] # 1st column of dd
>> > res <- boxcox(lm(dd1 +...
2023 Jul 08
1
Getting an error calling MASS::boxcox in a function
...something silly, but I can't see what it is. Any help appreciated.
library(MASS)
# Find optimised Lambda for Boc-Cox transformation
BoxCoxLambda <- function(z){
b <- boxcox(lm(z+1 ~ 1), lambda = seq(-5, 5, length.out = 61), plotit = FALSE)
b$x[which.max(b$y)] # best lambda
}
mrow <- 500
mcol <- 2
set.seed(12345)
dd <- matrix(rgamma(mrow*mcol, shape = 2, scale = 5), nrow = mrow, ncol = mcol)
# Try it not using the BoxCoxLambda function:
dd1 <- dd[,1] # 1st column of dd
bb <- boxcox(lm(dd1+1 ~ 1), lambda = seq(-5, 5, length.out = 101), plotit = FALSE)
print(pa...
2023 Jul 08
1
Getting an error calling MASS::boxcox in a function
...> appreciated.
>
> library(MASS)
>
> # Find optimised Lambda for Boc-Cox transformation
> BoxCoxLambda <- function(z){
> b <- boxcox(lm(z+1 ~ 1), lambda = seq(-5, 5, length.out = 61), plotit
> = FALSE)
> b$x[which.max(b$y)] # best lambda
> }
>
> mrow <- 500
> mcol <- 2
> set.seed(12345)
> dd <- matrix(rgamma(mrow*mcol, shape = 2, scale = 5), nrow = mrow, ncol =
> mcol)
>
> # Try it not using the BoxCoxLambda function:
> dd1 <- dd[,1] # 1st column of dd
> bb <- boxcox(lm(dd1+1 ~ 1), lambda = seq(-5, 5, leng...
2013 Mar 06
1
red SNA
...;,'Tom','Mary','Mary'),
group = c('a','b','c','a','b','c','d','b','d'),
stringsAsFactors = F)
df
m = table( df )
M = as.matrix( m )
# o M = as.matrix( table(df) )
Mrow = M %*% t(M)
Mrow
Mcol = t(M) %*% M
Mcol
df_yo <- data.frame( person =
c('Sam','Sam','Sam','Greg','Tom','Tom','Tom','Mary','Mary'),
group = c('a','b','c','a','b',...
2009 Jul 26
2
More complicated multi-plot layouts?
...plots sort
of like how I'd like to make a new plot. Hopefully it will get through
to the list.
Is there a way to do this directly using par somehow? Or one of the
other plotting packages? Basically, multiple larger plot above
multiple groups of smaller plots? The smaller plots are just
par(mrow=c(2,3)) things, and I can certainly do 2,6 for something
wider like this demo but I'm not clear how to specify an area for
larger plots above. Is it possible?
Thanks,
Mark
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2025 Jan 27
0
Model.matrix pregunta correcta
...n de diseño, uso los datos originales (sin factor). Como no tienen "trabajo extra" para preprar los datos se llaman datos0.
## La función de diseño de matriz es la siguiente:
```{r}
# función para crear el diseño de matriz
desgn <- function(v) {
if (is.numeric(v)) {
va = v
mrow = length(va)
mcol = max(va)
}
if (is.character(v)) {
vf = factor(v)
# Guarda el indice para cada nivel
va = as.numeric(vf)
mrow = length(va)
mcol = length(levels(vf))
}
# Inicio la martiz
X = matrix(data = c(0), nrow = mrow, ncol = mcol)
for (i in 1:mrow) {...
2013 Nov 22
2
[LLVMdev] new dragonegg 3.4 warning on darwin12
...xpa.c:226:5: warning: incompatible implicit declaration of built-in function ‘exit’ [enabled by default]
exit(6);
^
himenoBMTxpa.c: In function ‘newMat’:
himenoBMTxpa.c:239:5: warning: incompatible implicit declaration of built-in function ‘malloc’ [enabled by default]
malloc(mnums * mrows * mcols * mdeps * sizeof(float));
^
himenoBMTxpa.c: In function ‘clearMat’:
himenoBMTxpa.c:248:5: warning: incompatible implicit declaration of built-in function ‘free’ [enabled by default]
free(Mat->m);
^
'-cmpxchg16b' is not a recognized feature for this target (ignorin...
2013 Nov 22
0
[LLVMdev] new dragonegg 3.4 warning on darwin12
...ompatible implicit declaration of built-in function ‘exit’ [enabled by default]
> exit(6);
> ^
> himenoBMTxpa.c: In function ‘newMat’:
> himenoBMTxpa.c:239:5: warning: incompatible implicit declaration of built-in function ‘malloc’ [enabled by default]
> malloc(mnums * mrows * mcols * mdeps * sizeof(float));
> ^
> himenoBMTxpa.c: In function ‘clearMat’:
> himenoBMTxpa.c:248:5: warning: incompatible implicit declaration of built-in function ‘free’ [enabled by default]
> free(Mat->m);
> ^
> '-cmpxchg16b' is not a recognized fe...
2012 Jan 08
2
need help with axis ticks
hi,
i am using par(mrow=c(6,6)) function to get 6x6 plots on one screen. the
problem that i am having is that the axis tick labels are far away from the
ticks and going into previous plots (see attached figure). i need to know
how can i reduce the distance between the ticks and their values (y axis
values).the part of the...
2024 Dec 20
2
Colores diseño matriz
Hola,
Tienes varios ejemplos de cómo hacer esto en esta galería de gráficos,
tanto de R como de Python.
https://r-graph-gallery.com/heatmap.html
Gracias,
Carlos Ortega
www.qualityexcellence.es
El mar, 17 dic 2024 a las 14:38, Javier Marcuzzi (<
javier.ruben.marcuzzi en gmail.com>) escribió:
> Estimados
>
> Estoy pensando en buscar la forma para explicar algo, dentro de la forma
2005 Aug 24
1
extra parentheses cause death of kernel (PR#8094)
...and line interpreter (but it
does still show you command line completions on the bottom of the
window). The only exception I've found is when there is no character
string at all before the opening parenthesis. Then you can type as
quickly as you want with no ill effects.
--
Mickey Rowe (mrowe at lifesci.ucsb.edu)