search for: mpi2

Has anybody tried to use Rmpi with the OpenMPI library instead of LAM/MPI? LAM appears to be somewhat hardcoded in the Rmpi setup. Before I start to experiment with changing this, has anybody else tried Rmpi with non-LAM MPI implementations? Dirk -- Hell, there are no rules here - we're trying to accomplish something. -- Thomas A. Edison

...1132959 sec total mpi1: target 2 Sync at 160MHz width 16bit offset 127 QAS 1 DT 1 IU 1 mpi1: target 3 Sync at 160MHz width 16bit offset 127 QAS 1 DT 1 IU 1 mpi1: phys disk 0 Sync at 160MHz width 16bit offset 127 QAS 1 DT 1 IU 1 mpi1: phys disk 1 Sync at 160MHz width 16bit offset 127 QAS 1 DT 1 IU 1 mpi2 at pci3 dev 2 function 1 "Symbios Logic 53c1030" rev 0x07: ivec 0x7e4 scsibus3 at mpi2: 16 targets, initiator 7 "i2c" at mainbus0 not configured softraid0 at root bootpath: /pci at 1f,700000/scsi at 2,0/disk at 0,0 root on sd0a swap on sd0b dump on sd0b

Hi I am trying to utilize my dual core processor (and later a High-performance clusters (HPC) ) by using the Rmpi, snow, snowfall, ... packages, but I am struggling at the beginning, i.e. to initialise the "cluster" on my dual core computer. Whenever I try to initialize it (via sfInit(parallel=TRUE, cpus=2) or mpi.spawn.Rslaves(nslaves=2) ), I get an error message: >

Hi, I am using the db backend for the expire plugin and found the following error message in the logfile: dovecot: Jan 22 10:10:55 Error: dict: secondary db: unable to allocate space from the buffer cache dovecot: Jan 22 10:10:55 Error: dict: Failed to initialize dictionary 'expire' dovecot: Jan 22 10:10:55 Error: IMAP(xxxxxxxxxx): read(/var/dovecot/dict-server) failed: Remote

..../config.status config.status: creating src/Makevars ** libs x86_64-pc-linux-gnu-gcc -std=gnu99 -I/usr/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/include -DMPI2 -DOPENMPI -I/usr/local/include -fpic -march=nocona -O2 -pipe -fomit-frame-pointer -c RegQuery.c -o RegQuery.o x86_64-pc-linux-gnu-gcc -std=gnu99 -I/usr/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\"...

...aves = mpi.universe.size(), root = 0, intercomm = 2, comm = 1, > 3 hosts = NULL, needlog = TRUE, mapdrive = TRUE) > 4 { > 5 if (!is.loaded("mpi_comm_spawn")) > 6 stop("You cannot use MPI_Comm_spawn API") > > and occurs when the compiler variable MPI2 is undefined when your > package is installed. Likely this means that your mpi installation is > either old (unlikely?) or that your Rmpi installation failed to > properly detect the installed mpi version. It's difficult to know > which, without more information on how the mpi and...

Hello list. I'm trying to rebuild the 2.6.9.67.0.20.EL kernel, but it fails even without modifications. How did I try it? Created a (non-root) build environment (not a mock ) Installed the kernel.scr.rpm and did a rpmbuild -ba --target=`uname -m` kernel-2.6.spec 2> prep-err.log | tee prep-out.log The build failed at the end: Processing files: kernel-xenU-devel-2.6.9-67.0.20.EL Checking