search for: modeltool

Hi, While installing precompiled packages I often get warnings like the one in the subject. I usually ignore them, but I still do not understand why windows packages are build with unreleased versions of R. Is there some way to get packages build under R-2.2.0? What are potential problems that can result from that version mismatch? My system: winXP R version: 2.2.0 Jarek Tuszynski

...onte carlo simulation test with Cochran armitage trend test. Sir can you please help me to solve the problem. Here I copied the codes from R > library("coin") Loading required package: survival Loading required package: splines Loading required package: mvtnorm Error: package 'modeltools' required by 'coin' could not be found In addition: Warning messages: 1: package 'coin' was built under R version 2.6.0 2: package 'survival' was built under R version 2.5.1 3: package 'mvtnorm' was built under R version 2.5.1 > lungtumor <- data.frame(dos...

...control = boost_control( mstop = 2 ), weights = NULL ) Test case session on my computer: > dt=expand.grid(y=c(2,3,4), x1=c(1,2), x2=c(1,2)) > library(mboost) Loading required package: modeltools Loading required package: stats4 Loading required package: party Loading required package: survival Loading required package: splines Loading required package: grid Loading required package: coin Loading required package: mvtnorm Loading required package: zoo Attaching package: 'zoo'...

..."mgcv" "C:/PROGRA~1/R/R-27~1.0/library" "1.4-0" mlbench "mlbench" "C:/PROGRA~1/R/R-27~1.0/library" "1.1-3" mlmRev "mlmRev" "C:/PROGRA~1/R/R-27~1.0/library" "0.995-1" modeltools "modeltools" "C:/PROGRA~1/R/R-27~1.0/library" "0.2-15" moonsun "moonsun" "C:/PROGRA~1/R/R-27~1.0/library" "0.1" multcomp "multcomp" "C:/PROGRA~1/R/R-27~1.0/library" "1.0-0" m...

...it' 'maps' 'rcom' 'rscproxy' 'sp' 'VGAM' 'MCMCpack' 'sna' 'gee' 'anchors' 'survey' 'ape' 'flexmix' 'rmeta' 'mlmRev' 'MEMSS' 'coda' 'party' 'ipred' 'modeltools' 'e1071' 'AER' 'bdsmatrix' 'DAAG' 'fCalendar' 'fSeries' 'fts' 'its' 'timeDate' 'timeSeries' 'tis' 'tseries' 'xts' 'foreach' 'TSA' 'RSQLite' 'tkrplot' 'sge...

...) function. Any help would be appreciated. Again, the errors for these two packages: Error in length(label) : could not find function ".extendsForS3" Error: package/namespace load failed for 'doBy' > library(coin) Loading required package: mvtnorm Loading required package: modeltools Loading required package: stats4? #This is odd. I cannot find any reference for this package. AC Error in length(sig) : could not find function ".extendsForS3" Error: package 'stats4' could not be loaded ----- Forwarded Message ---- From: Adam Carr <adamlcarr at yahoo.co...

..._." "GCtorture" [4] "a" "euro" where the second one looks very suspicious. `party_0.4-0.tar.gz' is available from http://www.imbe.med.uni-erlangen.de/~hothorn/party_0.4-0.tar.gz and http://www.imbe.med.uni-erlangen.de/~hothorn/modeltools_0.2-3.tar.gz is required. The example below can be reproduced with both R-2.2.1 and R-2.3.0. Best wishes, Torsten R> invisible(options(echo = TRUE)) R> ### * <HEADER> R> ### R> attach(NULL, name = "CheckExEnv") R> assign(".CheckExEnv", as.environment...

...ate: $Date: 2005/06/27 06:38:16 $ Version: 0.2-2 Author: Torsten Hothorn, Kurt Hornik and Achim Zeileis Maintainer: Torsten Hothorn <Torsten.Hothorn at R-project.org> Description: Unbiased recursive partitioning in a conditional inference framework. Depends: R (>= 2.0.1), survival, grid, modeltools, coin Suggests: ipred SaveImage: yes License: GPL Packaged: Sun Jun 12 10:38:21 2005; hothorn _______________________________________________ R-packages mailing list R-packages at stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/r-packages

I am trying to calculate a Kullback-Leibler divergence from two vectors with integers but get NA as a result when trying to calulate the measure. Why? x <- cbind(stuff$X, morestuff$X) x[1:5,] [,1] [,2] [1,] 293 938 [2,] 293 942 [3,] 297 949 [4,] 290 956 [5,] 294 959 KLdiv(x) [,1] [,2] [1,] 0 NA [2,] NA 0 Best, Ralf

...ate: $Date: 2005/06/27 06:38:16 $ Version: 0.2-2 Author: Torsten Hothorn, Kurt Hornik and Achim Zeileis Maintainer: Torsten Hothorn <Torsten.Hothorn at R-project.org> Description: Unbiased recursive partitioning in a conditional inference framework. Depends: R (>= 2.0.1), survival, grid, modeltools, coin Suggests: ipred SaveImage: yes License: GPL Packaged: Sun Jun 12 10:38:21 2005; hothorn _______________________________________________ R-packages mailing list R-packages at stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/r-packages

...uot;The original top-level NEWS file" CITATION "inst/CITATION - the CITATION file from the source package's inst directory" Several CRAN packages have both NEWS and inst/NEWS (gdata, genetics, gplots, mcgibbsit, modeltools, nimble, RRF, session, SII). In most the two files are identical but in RRF and nimble they differ. Is the manual wrong is the code wrong? Bill Dunlap TIBCO Software wdunlap tibco.com [[alternative HTML version deleted]]

Hello! I am not familiar to deal with S4 objects in R, so this question can be stupid, but I hope I can get an answer. :P I'm trying to extract what are the response and explanatory variables from a Binary Tree and Random Forest. I could already extract the response variable from a Binary Tree using the response method specified on documentation. But Random Forest didn't had a similar

I'm running R 2.9.2 build 5464 on OS X 10.5.8. Having encountered memory allocation problems, I ran the problematic code in R64, the 64- bit version of the same build. When I attempt to load openNLP I receive the error message that the 32-bit version that I had been using does not run in R64. Assuming there is a 64-bit version, can I install and load it in R64 and, when I

Hi, I am working on a regression tree in Rpart that uses a continuous response variable that is ordered. I read a previous response by Pfr. Ripley to a inquiry regarding the ability of rpart to handle ordinal responses in 2003. At that time rpart was unable to implement an algorithm to handle ordinal responses. Has there been any effort to rectify this in recent years? Thanks! Stacey On

I'm in the process of converting some S3 methods to S4 methods. I have this function : setGeneric("enrichmentCalc", function(rs, organism, seqLen, ...){standardGeneric("enrichmentCalc")}) setMethod("enrichmentCalc", c("GenomeDataList", "BSgenome"), function(rs, organism, seqLen, ...) { ... ... ... })

...room egg haven markdown prettyunits rmarkdown utf8 callr ellipsis hexbin mime processx robustbase uuid cellranger evaluate highr modelr progress rprojroot vctrs cli fansi hms modeltools promises rstudioapi viridisLite clipr farver htmltools mstate ps rvest webshot coda.base flexmix htmlwidgets muhaz purrr scales whisker colorspace flexsurv httr munsell qpdf selectr...

..."aod","ape","mimR","minpack.l m","misc3d","mitools","mix","mixreg") TEMP <- c(TEMP,"mlbench","mlica","mlmRev","mmlcr","mnormt","MNP","moc","modeltools","moments","monoProc","monreg","mprobit","MPV","MSBVAR","msm","muhaz","multcomp","multilevel","multinomRob","multtest","mvbutils","mvnmle","mvnormte...

Thanks for all your great answers. The app I?m working on is indeed an exploratory data analysis tool for gene expression, which requires a bunch of bioconductor packages. I guess for now, my best solution is to divide my app into modules and load/unload packages as the user switch from one module to another. This brought me another question: it seems that unload package with the

...parseM?, ?xtable?, ?RUnit?, ?timeSeries?, ?akima?, ?mclust?, ?trimcluster?, ?prabclus?, ?caTools?, ?gWidgets?, ?chron?, ?acepack?, ?TeachingDemos?, ?Design?, ?subselect?, ?latticeExtra?, ?gWidgetstcltk?, ?hexbin?, ?deldir?, ?tripack?, ?DAAG?, ?VIM?, ?mitools?, ?Zelig?, ?lme4?, ?sna?, ?statnet?, ?modeltools?, ?coin?, ?zoo?, ?sandwich?, ?strucchange?, ?ipred?, ?gridBase?, ?ggplot2?, ?RColorBrewer?, ?plyr?, ?bitops?, ?pmml?, ?RGtk2?, ?ada?, ?amap?, ?arules?, ?biclust?, ?cairoDevice?, ?car?, ?cba?, ?colorspace?, ?doBy?, ?e1071?, ?ellipse?, ?fEcofin?, ?fBasics?, ?fpc?, ?gdata?, ?gtools?, ?gplots?, ?g...

...) function. Any help would be appreciated. Again, the errors for these two packages: Error in length(label) : could not find function ".extendsForS3" Error: package/namespace load failed for 'doBy' > library(coin) Loading required package: mvtnorm Loading required package: modeltools Loading required package: stats4? #This is odd. I cannot find any reference for this package. AC Error in length(sig) : could not find function ".extendsForS3" Error: package 'stats4' could not be loaded ----- Forwarded Message ---- From: Adam Carr <adamlcarr at yahoo.co...