Displaying 1 result from an estimated 1 matches for "ml16med".
Did you mean:
ml12med
2007 Mar 02
0
LIMMA contrast.matrix
...Email: roger.vallejo@ars.usda.gov <mailto:roger.vallejo@ars.usda.gov>
****************************************
> targets
SlideNumber FileName Cy3 Cy5
ml12med 12 ml12med.spot CD4 CD8
ml13med 13 ml13med.spot CD8 CD4
ml14med 14 ml14med.spot DN CD8
ml15med 15 ml15med.spot CD8 DN
ml16med 16 ml16med.spot CD4 DN
ml17med 17 ml17med.spot DN CD4
> design <- modelMatrix(targets, ref="CD4")
Found unique target names:
CD4 CD8 DN
> design
CD8 DN
ml12med 1 0
ml13med -1 0
ml14med 1 -1
ml15med -1 1
ml16med 0 1
ml17med 0 -1
> fit <- lmFit(MA, desig...