Displaying 1 result from an estimated 1 matches for "minmodulesize".
2010 Aug 06
1
Grouping clusters from dendrograms
...t overlap branches. However, I'm not
sure if this is because of the script I am using to visualise the data which
may be incorrect.
The script I tried was:
> dendro<-hclust(as.dist(combo2),method="average")
> cut2<-cutreeDynamicTree(dendro,maxTreeHeight=1,deepSplit=TRUE,minModuleSize=1)
I then used the following to visualise the data:
> cut2colour<-labels2colors(cut2)
> plotDendroAndColors(dendro,cut2colour,"Dynamic Tree Cut",
> dendroLabels=FALSE,hang=0.03,addGuide=TRUE,guideHang=0.05)
Any advice or ideas would be much appreciated!
Thanks,
Julia
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