search for: minmodulesize

Displaying 1 result from an estimated 1 matches for "minmodulesize".

2010 Aug 06
1
Grouping clusters from dendrograms
...t overlap branches. However, I'm not sure if this is because of the script I am using to visualise the data which may be incorrect. The script I tried was: > dendro<-hclust(as.dist(combo2),method="average") > cut2<-cutreeDynamicTree(dendro,maxTreeHeight=1,deepSplit=TRUE,minModuleSize=1) I then used the following to visualise the data: > cut2colour<-labels2colors(cut2) > plotDendroAndColors(dendro,cut2colour,"Dynamic Tree Cut", > dendroLabels=FALSE,hang=0.03,addGuide=TRUE,guideHang=0.05) Any advice or ideas would be much appreciated! Thanks, Julia --...