search for: miame

...all pacakges from Bioconductors with : source("http://www.bioconductor.org/getBioC.R") and getBioC(relLevel="release") somme errors append and when I make a library(affy) for example I obtain : > library(affy) Error in setIs("character", "characterORMIAME", where = where) : Class "character" is sealed; new superclasses can not be defined, except by setClassUnion Error in setIs("character", "characterORMIAME", where = where) : Class "character" is sealed; new superclasses can not be defi...

...[1] "initialize" [1] "open" [1] "open" [1] "update" [1] "update" [1] "close" [1] "close" Error in getClass(Class, where = topenv(parent.frame())) : "MIAME" is not a defined class Execution halted /bioinfo/apps/lib/R/bin/INSTALL: line 1: 761 Broken pipe cat "/home/sxv6413/rstuffs/lib/affy/R/affy" ERROR: execution of package source for 'affy' failed ** Removing '/home/sxv6413/rstuffs/lib...

...method for function '[': Error in c(BCR/ABL, NEG) : unused argument(s) (NEG) At this point, I really appreciate any inputs to move forward. ?. > str(ALL) > Formal class 'ExpressionSet' [package "Biobase"] with 7 slots > ..@ experimentData :Formal class 'MIAME' [package "Biobase"] with 13 slots > .. .. ..@ name : chr "Chiaretti et al." > .. .. ..@ lab : chr "Department of Medical Oncology, Dana-Farber Cancer Institute, Department of Medicine, Brigham and Women's Hospital, Harvard Med&quo...

...software project based on R. Version 1.1 features: ===================== * All packages from the 1.0 release are included. All current bug fixes have been applied, and most have upgraded and provide enhanced functionality. * New packages and major upgrades for release 1.1: affy: read.MIAME, a widget for entering phenoData. expresso, a flexible function for computing expression measures as well as providing widgets to choose among options in the various steps of preprocessing. rma, a fast and efficient function to compute the multi-array average expression measure. * Biob...

...software project based on R. Version 1.1 features: ===================== * All packages from the 1.0 release are included. All current bug fixes have been applied, and most have upgraded and provide enhanced functionality. * New packages and major upgrades for release 1.1: affy: read.MIAME, a widget for entering phenoData. expresso, a flexible function for computing expression measures as well as providing widgets to choose among options in the various steps of preprocessing. rma, a fast and efficient function to compute the multi-array average expression measure. * Biob...