search for: meys

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2010 Dec 21
2
Warning message when items of Hmisc are masked by loading a package.
...rev` [1] "53855" $language [1] "R" $version.string [1] "R version 2.12.1 (2010-12-16)" > Sys.info() sysname release version nodename machine login user "Windows" "7 x64" "build 7600" "JFMEYS-PC" "x86" "Joris" "Joris" -- Joris Meys Statistical consultant Ghent University Faculty of Bioscience Engineering Department of Applied mathematics, biometrics and process control tel : +32 9 264 59 87 Joris.Meys at Ugent.be -----------------------...
2017 Mar 28
2
`[` not recognized as a primitive in certain cases.
...; The `[` would _not_ be evaluated, quote() would return the symbol, and > the symbol would end up in the call. > > The two forms have virtually identical behavior as long as the call > ends up getting evaluated in the same environment. > > On Tue, Mar 28, 2017 at 3:03 AM, Joris Meys <jorismeys at gmail.com> wrote: >> Dear, >> >> I have noticed this problem while looking at the following question on >> Stackoverflow : >> >> http://stackoverflow.com/questions/42894213/s4-class-subset-inheritance-with-additional-arguments >> >...
2011 Feb 04
2
terribly annoying bug with POSIXlt : one o'clock is midnight?
...s.POSIXlt(0,origin="1970-01-01") [1] "1970-01-01 01:00:00 CET" > as.POSIXlt(0,origin="1970-01-01 00:00:00") [1] "1970-01-01 01:00:00 CET" > as.POSIXlt(0,origin="1970-01-01 23:59:59") [1] "1970-01-02 00:59:59 CET" Cheers -- Joris Meys Statistical consultant Ghent University Faculty of Bioscience Engineering Department of Applied mathematics, biometrics and process control tel : +32 9 264 59 87 Joris.Meys at Ugent.be ------------------------------- Disclaimer : http://helpdesk.ugent.be/e-maildisclaimer.php
2016 Sep 06
2
The use of match.fun
...rong. I've tried to find an example where this went wrong, but couldn't find one. Any pointer to what happened here is greatly appreciated. I've checked the NEWS, but I'm not smart enough to find the relevant bits and piece it together. Thank you in advance Cheers Joris -- Joris Meys Statistical consultant Ghent University Faculty of Bioscience Engineering Department of Mathematical Modelling, Statistics and Bio-Informatics tel : +32 (0)9 264 61 79 Joris.Meys at Ugent.be ------------------------------- Disclaimer : http://helpdesk.ugent.be/e-maildisclaimer.php [[alternativ...
2017 May 31
4
stats::line() does not produce correct Tukey line when n mod 6 is 2 or 3
...can honestly not understand why anyone in his right mind would defend a method that is clearly wrong while not working at Microsoft's spreadsheet department. Cheers Joris On Wed, May 31, 2017 at 4:03 PM, Serguei Sokol <sokol at insa-toulouse.fr> wrote: > Le 31/05/2017 ? 15:40, Joris Meys a ?crit : > >> OTOH, >> >> > sapply(1:9, function(i){ >> + sum(dfr$time <= quantile(dfr$time, 1./3., type = i)) >> + }) >> [1] 8 8 6 6 6 6 8 6 6 >> >> Only the default (type = 7) and the first two types give the result >> lines() give...
2010 Jun 18
3
Non-procedural access to columns of a matrix
Hi, I would like to have an index for a column in a matrix encoded in a cell of the same matrix. For example: x = matrix(c(11,12,13,1, 21,22,23,3, 31,32,33,2),byrow=T,ncol=4) In this case, column 4 is the index. I then access the column specified in the index by: > for (i in 1:3) print(x[i,x[i,4]]) [1] 11 [1] 23 [1] 32 > > for (i in 1:3) {x[i,x[i,4]] <- x[i,x[i,4]] + 5} > x
2010 Mar 30
2
weighted.median function from package R.basic
...using an internal sorting algorithm qsort. This speeded things up quite a bit. Alas, I can't find that package anywhere anymore. There is a weighted.median function in the package limma too, but I didn't use that before. Anybody who knows what happened to R.basic? Cheers Joris -- Joris Meys Statistical Consultant Ghent University Faculty of Bioscience Engineering Department of Applied mathematics, biometrics and process control Coupure Links 653 B-9000 Gent tel : +32 9 264 59 87 Joris.Meys@Ugent.be ------------------------------- Disclaimer : http://helpdesk.ugent.be/e-maildisclaim...
2014 Apr 19
1
lag() not returning a time series object
...function (x, k = 1, ...) { if (k != round(k)) { k <- round(k) warning("'k' is not an integer") } x <- hasTsp(x) p <- tsp(x) tsp(x) <- p - (k/p[3L]) * c(1, 1, 0) as.ts(x) # adjusted, was simply x before } Cheers Joris -- Joris Meys Statistical consultant Ghent University Faculty of Bioscience Engineering Department of Mathematical Modelling, Statistics and Bio-Informatics tel : +32 9 264 59 87 Joris.Meys@Ugent.be ------------------------------- Disclaimer : http://helpdesk.ugent.be/e-maildisclaimer.php [[alternative HTML...
2014 Oct 03
2
How I() works in a formula
...for a couple of days now trying to locate where this class assignment gets translated into a specific action, but i couldn't locate it. I've been as far as the internal C function modelframe. Any pointers on how I() is processed internally are greatly appreciated. Cheers Joris -- Joris Meys Statistical consultant Ghent University Faculty of Bioscience Engineering Department of Mathematical Modelling, Statistics and Bio-Informatics tel : +32 9 264 59 87 Joris.Meys at Ugent.be ------------------------------- Disclaimer : http://helpdesk.ugent.be/e-maildisclaimer.php [[alternative HT...
2017 May 31
1
stats::line() does not produce correct Tukey line when n mod 6 is 2 or 3
> On 31 May 2017, at 16:40 , Joris Meys <jorismeys at gmail.com> wrote: > > And with "equally spaced" I obviously meant "of equal size". It's getting > too hot in the office here... We have a fair amount of cool westerly wind up here that I could transfer to you via WWTP (Wind and Weather Transpo...
2017 May 18
2
[R] R-3.4.0 fails test
> On 18 May 2017, at 13:47 , Joris Meys <jorismeys at gmail.com> wrote: > > Correction: Also dlt uses the default timezone, but POSIXlt is not recalculated whereas POSIXct is. Reason for that is the different way values are stored (hours, minutes, seconds as opposed to minutes from origin, as explained in my previous mail) &...
2015 Apr 01
1
evaluation in transform versus within
On 01/04/2015 2:33 PM, Joris Meys wrote: > Thank you for the insights. I understood as much from the code, but I > can't really see how this can cause a problem when using with() or > within() within a package or a function. The environments behave like > I would expect, as does the evaluation of the arguments. T...
2018 Jan 31
3
Best practices in developing package: From a single file
On 31/01/2018 6:33 AM, Joris Meys wrote: > 3. given your criticism, I'd like your opinion on where I can improve > the documentation of https://github.com/CenterForStatistics-UGent/pim. > I'm currently busy updating the help files for a next release on CRAN, > so your input is more than welcome. After this...
2010 Jun 24
2
count data with a specific range
I would like to prepare the data for barplot. But I only have the data frame now. x1=rnorm(10,mean=2) x2=rnorm(20,mean=-1) x3=rnorm(15,mean=3) data=data.frame(x1,x2,x3) If there a way to put data within a specific range? The expected result is as follows: range x1 x2 x3 -10-0 2 5 1 (# points in this
2017 Mar 28
2
`[` not recognized as a primitive in certain cases.
...r as.call() ), the function `[` is or is not recognized as a primitive by is.primitive() The behaviour is counterintuitive and -unless I miss something obvious here- likely to be a bug imho. I immediately admit that my C chops aren't sufficient to come up with a patch. Cheers Joris -- Joris Meys Statistical consultant Ghent University Faculty of Bioscience Engineering Department of Mathematical Modelling, Statistics and Bio-Informatics tel : +32 (0)9 264 61 79 Joris.Meys at Ugent.be ------------------------------- Disclaimer : http://helpdesk.ugent.be/e-maildisclaimer.php [[alternativ...
2015 Apr 01
4
evaluation in transform versus within
...7 7 -0.262064017 5.5 > 8 8 -0.652301191 5.5 > 9 9 0.673609455 5.5 > 10 10 -0.075590905 5.5 > > with(df, mean(x)) > [1] 5.5 > > P.S. this is probably an r-help question. > > Best, > ~G > > > > > On Wed, Apr 1, 2015 at 10:21 AM, Joris Meys <jorismeys at gmail.com> wrote: > > > Dear list members, > > > > I'm a bit confused about the evaluation of expressions using with() or > > within() versus subset() and transform(). I always teach my students to use > > with() and within() because of the w...
2010 Jun 08
2
Please help me
Dear Mr. or Ms.,   I used the R-software to run the zero-inflatoin negative binomial model (zeroinfl()) .   Firstly, I introduced one dummy variable to the model as an independent variable, and I got the estimators of parameters. But the results are not satisfied to me. So I introduced three dummy variables to the model. but I could not get the results. And the error message is
2017 Jun 27
2
texi2pdf doesn't find the correct MikTex installation due to erroneous Sys.which()
...X~1.9\\miktex\\bin\\x64\\texify.exe" That folder is not on my computer (I have 2.9 installed), not in my path, not in my system path and I couldn't find it in my register. So it appears as if Sys.which() is looking in the wrong place. What could cause this? Kind regards Joris -- Joris Meys Statistical consultant Ghent University Faculty of Bioscience Engineering Department of Mathematical Modelling, Statistics and Bio-Informatics tel : +32 (0)9 264 61 79 Joris.Meys at Ugent.be ------------------------------- Disclaimer : http://helpdesk.ugent.be/e-maildisclaimer.php [[alternativ...
2010 Jul 28
1
strange error : isS4(x) in gamm function (mgcv package). Variable in data-frame not recognized???
...: num -23.4 -23.6 -19.5 -16.1 -15.3 ... $ PP : num 6.17 4.27 -4.93 -9.23 -2.63 ... $ RF : Ord.factor w/ 3 levels "None"<"<2.5mm"<..: 1 1 1 1 1 1 1 1 1 1 ... - attr(*, "means")= num Any idea what I'm missing here? Cheers Joris -- Joris Meys Statistical consultant Ghent University Faculty of Bioscience Engineering Department of Applied mathematics, biometrics and process control tel : +32 9 264 59 87 Joris.Meys at Ugent.be ------------------------------- Disclaimer : http://helpdesk.ugent.be/e-maildisclaimer.php
2017 Sep 28
5
Duncan's retirement: who's taking over Rtools?
...continue providing Rtools and a Windows build, or are these tasks left open for anyone (possibly Microsoft itself) to take them over? And if so, how will the decision be made on that? Cheers Joris -- ----------- Biowiskundedagen 2017-2018 http://www.biowiskundedagen.ugent.be/ ----------- Joris Meys Statistical consultant Ghent University Faculty of Bioscience Engineering Department of Mathematical Modelling, Statistics and Bio-Informatics tel : +32 (0)9 264 61 79 Joris.Meys at Ugent.be ------------------------------- Disclaimer : http://helpdesk.ugent.be/e-maildisclaimer.php [[alternativ...