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metlinfile
2007 Apr 02
0
Object problems with Generic and rematchDefinition
...= vector(),
MSMSpreZ = vector(), MSMScount= vector() ))
if ( !isGeneric("searchM") )
setGeneric("searchM", function(object, ...) standardGeneric("searchM"))
setMethod("searchMetlin", "xcmsRaw", function(object, cost=5, ppm=10) {
metlinfile<-url("http://") # need to add URL
met.xml<-read.metlin(metlinfile)
Pcount<-object at env$peaksCount
values<-matrix(nrow=length(Pcount), ncol= 6)
colnames(values)<-c("Name", "Distance", "precursor MZ", "precursor
Z", &...