search for: metabolic

Displaying 20 results from an estimated 53 matches for "metabolic".

2011 Feb 04
1
rbinom and probability
Hello compadRes, I'm developing a script that selects "cells" over a certain metabolic rate to kill them. A rate between 9 and 12 means that the cells are candidates for death. I'll show you what I mean: # a would be a vector of cell metabolic rates. a<-c(8, 7, 9, 6, 10, 11, 4, 5, 6) #now identify which cells will be candidates for death, namely those cells with metabolic...
2012 Sep 19
2
write.table: strange output has been produced
Good afternoon all - While making a steady progress in learning R after Matlab I encountered a problem which seems to require some extra help to move over. Basically I want to merge a data from biological statistical dataset with annotation data extracted from another dataset using an 'id' crossreference and write it to report file. The first part goes absolutely fine, I have merged both
2011 Mar 16
4
fetch uneven
Hi I have a vector m: m [1] "ABC transporters" [2] "2" [3] "Acetyl-CoA" [4] "1" [5] "Energie" [6] "1" [7] "FAD Biosynthese"
2010 Jan 29
0
Statistical Position Supporting Systems Biology
Position: Statistician in a systems biology team focused on metabolic disorders such as diabetes and obesity. The position is part of a statistics group supporting Pfizer global research and development. Role and Responsibilities: The statistician will be an integral member of a systems biology team which develops and/or uses computational and statistical approa...
2010 Apr 01
2
canary_thread
People, Anybody knows what mean this message in my CLI: [Apr 1 16:58:34] WARNING[3845]: asterisk.c:3050 canary_thread: The canary is no more. He has ceased to be! He's expired and gone to meet his maker! He's a stiff! Bereft of life, he rests in peace. His metabolic processes are now history! He's off the twig! He's kicked the bucket. He's shuffled off his mortal coil, run down the curtain, and joined the bleeding choir invisible!! THIS is an EX-CANARY. (Reducing priority) mediagw*CLI> Asterisk: 1.6.2.6 tks _______________________...
2020 Feb 19
2
How to index the occasions in a vector repeatedly under condition 1? if not, it will give a new index.
Dear all, Could you please help me how to get the output as I described in the following example? x<-c(543, 543, 543, 543, 551 , 551 ,1128 ,1197, 1197) diff<-x-lag(x) diff [1] NA 0 0 0 8 0 577 69 0 How to index the occasions in x repeatedly if the diff<15? if diff>=15, it will give a new index. I want the output be like y. y<-c(1,1,1,1,1,1,2,3,3) Thank you so
2020 Feb 19
2
How to index the occasions in a vector repeatedly under condition 1? if not, it will give a new index.
Dear all, Could you please help me how to get the output as I described in the following example? x<-c(543, 543, 543, 543, 551 , 551 ,1128 ,1197, 1197) diff<-x-lag(x) diff [1] NA 0 0 0 8 0 577 69 0 How to index the occasions in x repeatedly if the diff<15? if diff>=15, it will give a new index. I want the output be like y. y<-c(1,1,1,1,1,1,2,3,3) Thank you so
2010 Dec 17
1
ggplot missing fill colours in boxplot legend
...ggplot(CorbulaMR3,aes(factor(Site),VO2)) p+geom_boxplot(aes(fill=factor(Day)))+scale_fill_manual('Day', breaks = c('Day 1', 'Day 2'), + values = c('grey','black'), + labels = c('Day 1', 'Day 2'))+xlab('Sampling Site')+ylab('Metabolic Rate')+opts(title="Sampling") I've played around and if I don't use the scale_fill_manual() and instead simply plot using p+geom_boxplot(aes(fill=factor(Day))) the legend boxes are filled, but obviously plot/legend is not labeled in the manner I would like and I don't m...
2010 May 11
1
comparing and combing files
Hello, I have two tab-delimited files which I would like to combine. In the first one I have gene IDs (Unique) on column 1 and than various experimental results from microarray analysis (see attached files list1 ) the second arrays have the same genes IDs (more and in a different order, some are double) (see attached files list2 ) What I would like to do is to search in the second list for gene
2010 Apr 28
1
Strange Error -- ASterisk 1.6
...eudo-realtime priority for the process, but I am looking for a little confirmation from the group: [Apr 28 12:28:36] WARNING[20773] asterisk.c: The canary is no more. He has ceased to be! He's expired and gone to meet his maker! He's a stiff! Bereft of life, he rests in peace. His metabolic processes are now history! He's off the twig! He's kicked the bucket. He's shuffled off his mortal coil, run down the curtain, and joined the bleeding choir invisible!! THIS is an EX-CANARY. (Reducing priority) Thanks, Seann -------------- next part -------------- A non-text...
2015 Jun 24
0
Post-doc in Systems Genetics, Gagneur lab, Munich
...ic diseases by integration of personal omics data. Research topics include: identifying causal mutations of rare disease patients by meta-analysis; inferring disease-causing molecular pathways from genotype, phenotypes, and omics profile of patient-derived cell lines (transcritptomic, proteomic and metabolic). The developed methods will be applied to data from our collaborator Dr. Holger Prokisch, Institute of Human Genetics of Munich (cellular respiratory disorders) and will lead to functional validation studies directly on cell lines derived from patients. The successful candidate will be part of SO...
2011 Jan 21
1
ggplot boxplot
...s(factor(Site),VO2)) p+geom_boxplot(aes(fill=factor(Cruise)))+scale_fill_manual('Cruise', values=(colours()[c(375,577,573,439)]), breaks=c(1,2,3,4), labels=c('Cruise 1', 'Cruise 2', 'Cruise 3', 'Cruise 4'))+xlab('Sampling Site')+ylab(expression("Metabolic Rate " (mu*moles*~O[2]*~mg^-1*~hr^-1)))+opts(title="Corbula Cruises")+ylim(c(0,0.2)) The issue I have at the moment is that only Cruises 2 and 3 are plotted correctly. The other two are not shown or the boxes are plotted as single horizontal lines. I also get a warning that 129 ro...
2011 Mar 20
1
(no subject)
HI, While I was working on R , I had a pop up from mcafee asking me if I wasih to block or allow something to connect. I did not see r in the question, so I had clicked on the option " block". since then, when I start R through excel , I only get R console and I do nto get R script anymore. Please advise Thanks
2004 Jun 14
1
olesolve: stepsize
Hi, I am doing a project on the simulation of glucose metabolism based on a pharmacokinetic modeling in which we have 4 differential equations. I did this in R by using the odesolve package. It works very well, but I have two questions: Here is the odemodel function _________________________________________________ Ogtt.Odemodel <- function(t, y, p) { absx <- c(-60, -45, -30,
2008 Jul 28
1
Interpolating a line and then summing there values for a diurnal oxygen curve (zoo object)
#I would like to interpolate a straight line between 06/08/06 04:16:00 - 06/08/06 20:31:00 with values and then sum them. This is an estimate of ecosystem #respiration and I will be using this in a larger context(48 days of these diurnal curves), but for right now I am just trying to figure out how to do it for this one #day example. I have some other code for Ecosystem (stream) Metabolism that
2009 Oct 29
1
singular variance-covariance warning in lmer
Dear R Users, I was hoping for some help with a recurrent error message in lmer. I am trying to model the effect of temperature on metabolic rate in animals (response = int.length) at different temperatures (mean.sst), with repeated measurements on the same individuals (random effect = female). Ideally I would make a random slope and intercept model where the rate can change differently with temperature for different individuals: model...
2020 Oct 07
2
Is it possible that "virsh destroy" does not stop a domain ?
Hi, Is it possible that "virsh destroy" does not stop a domain ? I'm asking because i have some domains running in a two-node HA-Cluster (pacemaker). And sometimes one node get fenced (killed) because it couldn't stop a domain. That's very ugly. This is also the reason why i asked before what "virsh destroy" really does ? IIRC a kill -9 can't terminate a
2020 Feb 14
3
can hotplug vcpus to running Windows 10 guest, but not unplug
Hi, i'm playing a bit around with vcpus. My guest is Windows 10 1903. This is the excerpt from the config: ... <vcpu placement='static' current='2'>4</vcpu> <vcpus> <vcpu id='0' enabled='yes' hotpluggable='no'/> <vcpu id='1' enabled='yes' hotpluggable='yes'/> <vcpu id='2'
2020 Sep 20
1
can't define domain - error: cannot open /dev/null: Operation not permitted
Hi, i have a two-node cluster running on SLES 12 with pacemaker. The cluster refused to start the domains on one node. So i took some of the domains out of the cluster and tried to start it manually. This is what happened: virsh # define /mnt/share/vm_documents-oo.xml error: Failed to define domain from /mnt/share/vm_documents-oo.xml error: cannot open /dev/null: Operation not permitted Same
2007 Mar 18
1
HELP...Running data
We are two french students and we have a problem concerning an exercize. We don't know how to resolve it. It would be fantastic if someone can help us. Thanks. Description: This study examined how the metabolic cost of locomotion varied with speed, stride frequency and body mass. Cost was determined by measuring oxygen consumption (?vo2?), analyzing the oxygen content in air inhaled and exhaled by the subjects through a mask. The rate of oxgen consumption was measured for three ?subject?s locomoting at al...