Displaying 1 result from an estimated 1 matches for "metab_metadata".
2013 May 17
1
Problem with ordiellipse coloured factor in Vegan
Hello R experts,
I am trying to plot ordiellipse for my data but the col according to
factors.
Metabolites_raw= read.csv(file.choose(), head = TRUE) #file
21Metabolites.csv
Metabolites_t=t(Metabolites_raw[,2:82])
ord <- metaMDS(Metabolites_t, distance="bray")
symbol=as.numeric(Metab_metadata$LandType)
col.list <- c("red","slategray","seagreen","cyan","pink","brown","black",
"blue","yellow","magenta")
palette(col.list)
plot(ord$points, col = Metab_metadata$Day+2,pch=symbol, xlim=c...