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met
2010 Jul 21
0
Converting Between Character and Numeric Objects
...in the following example matrix, I get a list of flux expressions
('v') just like I want:
testS = matrix(c(-1, 0, 2, -1, -1, 0, 0, -1, -1, 1, 0, 0, 0, 1, 0),
nrow = 5,
ncol = 3,
byrow = TRUE)
rownames(testS) = c("met1", "met2", "met3", "met4", "met5")
colnames(testS) = c('rxn1', 'rxn2', 'rxn3')
v = makeMassActionFluxes(testS)
v
[1] "met1^1*met2^1" "met2^1*met3^1" "met3^1"
My next step is to use an ODE generating function to initialize values for
the met variables.
state = c(met1 = 1...