search for: meansqresid

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2003 Apr 22
4
fisher exact vs. simulated chi-square
...on's Chi-squared test data: ta X-squared = 9.6976, df = 4, p-value = 0.04584 Warning message: Chi-squared approximation may be incorrect in: chisq.test(ta) # simulate values by hand, based on r2dtable example > expected <- outer(rowSums(ta), colSums(ta), "*") / sum(ta) > meanSqResid <- function(x) mean((x - expected) ^ 2 / expected) > sum(sapply(r2dtable(100000, rowSums(ta), colSums(ta)), meanSqResid) >= meanSqResid(ta))/ 100000 [1] 0.03939 # is similar to > sum(sapply(r2dtable(100000, rowSums(ta), colSums(ta)), function(x) { chisq.test(x)$sta...