search for: mcneney

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2012 Apr 06
2
R CMD check returns NOTE about package data set as global variable
...ge's functions requires this data frame. A toy example is: test<-function() { data(RutgersMapB36) return(RutgersMapB36[,1]) } R CMD check returns a NOTE: test: no visible binding for global variable 'RutgersMapB36' Is there any way to avoid this NOTE? Thanks, Brad --- Brad McNeney Statistics and Actuarial Science Simon Fraser University
2000 Feb 19
1
problem with glm (PR#452)
...m = alpha-dec-osf5.0 arch = alpha os = osf5.0 system = alpha, osf5.0 status = Patched major = 0 minor = 99.0 year = 2000 month = February day = 9 language = R Search Path: .GlobalEnv, Autoloads, package:base ------------------------------------------------------------------------- Brad McNeney email: mcneney@stat.sfu.ca Department of Mathematics and Statistics web: www.math.sfu.ca/~mcneney/ Simon Fraser University phone: 604.291.4815 8888 University Drive fax: 604.291.4947 Burnaby, British Columbia Canada V5A 1S6 -...
2003 Nov 19
0
multinom question
...log-linear model for 4 categories of the form log[(P(D=i | X)/P(D=0 | X)] = alpha_i + X beta_i ; i=1,2,3 but with beta_1 constrained to zero. Is there a way to impose such a constraint in the multinom function? Brad ------------------------------------------------------------------------- Brad McNeney email: mcneney at stat.sfu.ca Dept. of Statistics and Actuarial Sci. web: www.stat.sfu.ca/~mcneney/ Simon Fraser University phone: 604.291.4815 8888 University Drive fax: 604.291.4368 Burnaby, British Columbia Canada V5A 1S6
2000 May 22
0
memory problem with DEC C (was: problem with glm (PR#452))
...ariables that are still in use get clobbered during garbage collection. No problems if I compile with gcc though. I've made some attempts to see if I can identify a specific compiler optimization that is responsible, but so far no luck. Brad On 5 Mar 2000, Peter Dalgaard BSA wrote: > Brad McNeney <mcneney@cs.sfu.ca> writes: > > > I don't know if the following is relevant, but for some reason I've found > > I can avoid this particular problem if I make a small change in lapply in > > its main loop. Around line 50 of apply.c: > > > > PRO...
2011 Feb 02
4
exact logistic regression
Hello to R people Does anybody know to calculate exact logistic regression in R? Does such option exist anywhere? Surprisingly, could not find it using search engine. It is hard to believe, however, that such useful function is not implemented in R yet? Could you help, please Thank you Denis
2001 Jun 25
5
Trouble compiling R-1.3.0 under Tru64
Dear all, I have some difficulty getting R-1.3.0 to run on the alpha, with osf4.0e (Tru64, or whatever they call it... :-) ). configure reports the following configuration: R is now configured for alphaev6-dec-osf4.0e Source directory: . Installation directory: /astro/local C compiler: gcc -mieee -g -O2 C++ compiler: c++ -g -O2 FORTRAN
2001 Jun 25
5
Trouble compiling R-1.3.0 under Tru64
Dear all, I have some difficulty getting R-1.3.0 to run on the alpha, with osf4.0e (Tru64, or whatever they call it... :-) ). configure reports the following configuration: R is now configured for alphaev6-dec-osf4.0e Source directory: . Installation directory: /astro/local C compiler: gcc -mieee -g -O2 C++ compiler: c++ -g -O2 FORTRAN
2001 Jan 08
0
cleaning up the BUGS list
...y they obscure the bugs needing attention. I am about the remove the following. If anyone thinks they are still relevant, could you please send a follow-up to R-bugs with details under 1.2.0 or later. (Please do put (PR#xxx) on the subject line.) * PR# 452 * Subject: problem with glm From: Brad McNeney <mcneney@cs.sfu.ca> Date: Fri, 18 Feb 2000 17:51:54 -0800 (PST) --Problems on Alpha's with glm. Status unclear * PR# 533 * Subject: acepack, akima and tripack will not load From: mallen@tntech.edu Date: Thu, 4 May 2000 19:18:59 +0200 (MET DST) --related to PR#521: probably compiler-specif...
2003 Jun 04
1
standard errors from glm (PR#3180)
In the iterative weighted least squares loop of the glm.fit function, a QR decomposition of the matrix X*sqrt(w) is obtained at each iteration, using fitted values of the mean response mu from the previous interation. Here "X" is the design matrix, w = wt*(d(mu)/d(eta))/variance(mu), "wt" is the vector of weights, and "d(mu)/d(eta)" is the derivative of mu wrt the
2008 Nov 07
0
clogit and small sample sizes: what to do?
...gon, MD, DrPH -----old post 2002 end------------ At that time, the answers were not too encouraging. Anyway, I might have the very same query 2008. Ok, I tried to do some homework and started to look for packages maybe implementing different methods. I did run across 'elrm' (Zamar, D., McNeney, B. & Graham, J., 2007), but I am unsure whether this package is appropriate for my original 1:3 matched design. - ---Blah blah part end-------- - ---Questions, finally!--- So my questions to you are: 1) Is the problem I describe above likely related to small sample sizes? 2) Do you have ex...
2010 Oct 31
1
R-help Digest, Vol 92, Issue 31
...k (NJ, USA) (Liaw, Andy) 33. doubt in climate variability analysis in R! (govindas@msu.edu) 34. I got lot in the permutation (cbbaniya@gmail.com) 35. Re: Clustering (dpender) 36. Re: Please help me about Monte Carlo Permutation (Chitra) 37. Re: Cox Proportional Models and Haplotypes (Brad McNeney) 38. Re: draw path diagram using dot (eshi) 39. Re: Clustering (David Winsemius) 40. Tukey post hoc comparison (glht?) after 3factorial mixed model (lmer) (Anna Radtke) 41. Re: Clustering (David Winsemius) 42. Repeated Measures MANOVA (Christopher Kurby) 43. Re: scatterplot3d;...