search for: maxtree

...(aa)) aar <- rep (aa[length(aa)], length(aa)) aa3 <- c(aal,aa,aar) aa3ts <- create.signalSeries(aa3, pos=list(from=0.0, by=0.033)) #CONVERT AMPLITUDE INTO TIME-SERIES aa3.cwt <- wavCWT(aa3ts) #CWT aa3.maxtree <- wavCWTTree (aa3.cwt, type="maxima") # GENERATE CWT MAXIMA TREE aa3.maxpeak <- wavCWTPeaks (aa3.maxtree) #GET MAXIMUM PEAKS Notice that in this case the generated tree (Bad-Tree-Configuration) has only 4 branches. I believe this may cause the error I ge...

...10.5 Submission from: (NULL) (87.4.122.234) Here is the code that causes wavCWTPeaks error aats <- create.signalSeries(aa, pos=list(from=0.0, by=0.033)) aa.cwt <- wavCWT(aats) x11 (width=10,height=12) plot (aats,main=paste(insig," Cycle: ",j,sep="")) aa.maxtree <- wavCWTTree (aa.cwt, type="maxima") aa.mintree <- wavCWTTree (aa.cwt, type="minima") aa.maxpeak <- wavCWTPeaks (aa.maxtree) aa.minpeak <- wavCWTPeaks (aa.mintree) Error in `row.names<-.data.frame`(`*tmp*`, value = c("1", "0")) : i...

...unrooting trees, changing the root of the tree. The package also includes functions such as "consensus", "coaltime, "popsize", "treedist" for summarizing phylogenetic trees, calculating the coalescence time, population size, and tree distance. The function maxtree is built in the package to esimtate the species tree from multiple gene trees. * pooh (0.2) Charles J. Geyer http://crantastic.org/packages/pooh functions for computing closures of relations * potts (0.3-4) Charles J. Geyer http://crantastic.org/packages/potts the title says it al...