search for: marhat

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2012 Feb 16
1
help with ancestral.pars in phangorn package
Hello, I'm struggling with understanding the output on the ancestral.pars() command from the phangorn package, I'm new to doing phylogenetic analyses using R. I used it on nucleotide data, and it works fine, I'm just not sure how to read the output. The output is phyDat class, and outputs a matrix for each node/leaf in the tree. I figured out that the matrix columns represent the four
2012 Jan 19
1
question re. package playwith not able to run command getting error message that I'm attempting to use non function
Hello, I managed to install playwith package and all its prerequisites. My R version is R 2.14: R version 2.14.1 (2011-12-22) Copyright (C) 2011 The R Foundation for Statistical Computing ISBN 3-900051-07-0 Platform: i486-pc-linux-gnu (32-bit) All my packages were updated, and recently installed. When I attempt to use the command playwith I get the following error message: >