Displaying 20 results from an estimated 68 matches for "malign".
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2002 Jun 03
1
build fails dumping R code in 'methods' on i686-pc-linux-gnu (PR#1630)
...es:
zcat R-release.diff.gz | patch -p1
R is now configured for i686-pc-linux-gnu
Source directory: .
Installation directory: /usr/local
C compiler: gcc -D__NO_MATH_INLINES -mieee-fp -O2 \
-pipe -s -mpentiumpro -mcpu=pentiumpro -march=pentiumpro -mieee-fp \
-malign-loops=2 -malign-jumps=2 -malign-functions=2 \
-mpreferred-stack-boundary=2
C++ compiler: g++ -mieee-fp -O2 -pipe -s -mpentiumpro \
-mcpu=pentiumpro -march=pentiumpro -mieee-fp -malign-loops=2 \
-malign-jumps=2 -malign-functions=2 -mpreferred-stack-boundary=2
FORTRAN compiler:...
2007 Jun 06
2
Multiple color schemes for barchart (lattice)
Hello R-help.
I am trying to make a stacked barplot where the color of the sections of
each bar depend on another variable.
> myData[1:11,]
score percent marker cellType Malignant
1 0 100.00000 ESR1 (ER) Bladder.M(5) TRUE
2 0 80.00000 PAX8 Bladder.M(5) TRUE
3 1 20.00000 PAX8 Bladder.M(5) TRUE
4 0 100.00000 ESR1 (ER) Brain.N(3) FALSE
5 0 100.00000 PAX8 Brain.N(3) FALSE
6 3 100.00000 ESR1 (ER) Breast.M(11) TRUE
7 0 100...
2002 Jun 04
0
build fails dumping R code in 'methods' on i686-pc-linux-gnu (PR#1632)
...p1
>
> R is now configured for i686-pc-linux-gnu
>
> Source directory: .
> Installation directory: /usr/local
> C compiler: gcc -D__NO_MATH_INLINES -mieee-fp -O2 \
> -pipe -s -mpentiumpro -mcpu=pentiumpro -march=pentiumpro -mieee-fp \
> -malign-loops=2 -malign-jumps=2 -malign-functions=2 \
> -mpreferred-stack-boundary=2
> C++ compiler: g++ -mieee-fp -O2 -pipe -s -mpentiumpro \
> -mcpu=pentiumpro -march=pentiumpro -mieee-fp -malign-loops=2 \
> -malign-jumps=2 -malign-functions=2 -mpreferred-stack-boundary=2...
2003 May 14
0
kernel conf not applied to modules?
...kernel modules, the kernel options are not
available to the modules.
For example, my if_em.ko is not being compiled with the DEVICE_POLLING
configuration
It looks like "-include opt_global.h" is not being applied when compiling
the module.
Kernel compilation of if_em.c:
cc -c -O2 -pipe -malign-loops=4 -malign-jumps=4 -malign-functions=4
-mcpu=i686 -march=i686 -fno-gcse -DBOOT_COMCONSOLE_SPEED=115200 -Wall
-Wredundant-decls -Wnested-externs -Wstrict-prototypes -Wmissing-prototypes
-Wpointer-arith -Winline -Wcast-qual -fformat-extensions -ansi -g -nostdinc
-I- -I. -I/d2/ddolson/src/sys...
2001 Feb 28
0
-malign-double
I was just looking at the documentation for g77 and noticed the
following, and also noticed that it is not used when fortran for a
package is compiled with the default (i.e. no Makefile in src
directory.) Should it be considered?
Paul Gilbert
_____
`-malign-double'
(Intel x86 architecture only.)
Noticeably improves performance of `g77' programs making heavy use
of `REAL(KIND=2)' (`DOUBLE PRECISION') data on some systems. In
particular, systems using Pentium, Pentium Pro, 586, and 686
implementations of the i3...
2003 Mar 03
0
Re: [BK PATCH] klibc for 2.5.63
.../i386/MCONFIG 1.1 vs edited =====
--- 1.1/usr/lib/arch/i386/MCONFIG Sat Feb 15 23:53:51 2003
+++ edited/usr/lib/arch/i386/MCONFIG Mon Mar 3 21:18:08 2003
@@ -13,12 +13,19 @@
# them to be cdecl
# REGPARM = -mregparm=3 -DREGPARM
-OPTFLAGS = $(REGPARM) -march=i386 -Os -fomit-frame-pointer \
- -malign-functions=0 -malign-jumps=0 -malign-loops=0
-BITSIZE = 32
+#check_usergcc = $(shell if $(USERCC) $(1) -S -o /dev/null -xc /dev/null > \
+ /dev/null 2>&1; then echo "$(1)"; else echo "$(2)"; fi)
+
+
+OPTFLAGS := $(REGPARM) -march=i386 -Os -fomit-frame-pointer
+OPTFLAGS...
2003 Jul 31
3
Trying to test with 2.6.0-test2
Hi folks,
I haven't tested initramfs with klibc before and am having trouble
getting going. I tried to pull from the klibc-2.5 bk repository but
it doesn't merge with 2.6t2. Also i downloaded the .80 version and
tried to compile but got a stream of errors and warnings. It looks like
it needs to be compiled from within the kernel tree but i couldn't find any
docs about the
2004 Jan 25
1
syslinux for opteron
...ing to build syslinux under gentoo on in 64 bit mode on an opteron. I get output like this
../com32/include/com32.h: In function `MK_PTR':
../com32/include/com32.h:77: warning: cast to pointer from integer of different size
gcc -I../com32/include -g -Wall -O2 -fomit-frame-pointer -march=i386 -malign-functions=0 -malign-jumps=0 -malign-loops=0 -DVERSION='"2.06"' -DDATE='""' -S -o e820test.s e820test.c
memset.S: Assembler messages:
memset.S:13: Error: suffix or operands invalid for `push'
memset.S:14: Error: suffix or operands invalid for `push'
memset...
2002 Aug 24
1
klibc 0.57 trouble
...so far, I haven't been
able to run any shared binaries. How are they supposed to
work? I always get something like
$ ./tests/minihello.shared
bash: tests/minihello.shared: No such file or directory
there are also lots of compiler warnings:
- gcc 3.2 (i386) doesn't like the '-malign-functions=0 -malign-jumps=0
-malign-loops=0', it wants the '-falign...' versions instead, which
don't work with gcc 2.95 :(
- some of the asm/ kernel headers don't like being compiled with '-W',
e.g. asm-s390/bitops.h
- tests/testvsnp.c causes lots of warnings...
2013 Jan 11
0
Weighted Kappa for m Raters
Hello, I have 50 raters and 180 cases which are rated as malignant, probably malignant, probably benign, and benign. I want to compare all the raters but I want a weighted kappa to penalize differences between malignant and benign more than differences between malignant and probably malignant. I only found the weighted option in the 2-rater functions (kappa...
2005 Jan 19
1
build klibc with gcc 2.96 fails
I get the following error:
make[1]: Entering directory `/home/greg/src/klibc/klibc-0.196/klibc'
gcc -Wp,-MT,__static_init.o,-MD,./.__static_init.o.d -march=i386 -Os -g -malign-functions=0 -malign-jumps=0 -malign-loops=0 -nostdinc -iwithprefix include -D__KLIBC__ -DBITSIZE=32 -I.. /include/arch/i386 -I../include/bits32 -I../include -I../linux/include -I../linux/include2 -I ../linux/include -DWITH_ERRLIST -W -Wall -Wpointer-arith -Wwrite-strings -Wstrict-prototypes -Winli...
2003 Oct 15
3
build failure with linux-2.6.0-test7
I tried building with linux-2.6.0-test7
build dies with:
make[1]: Entering directory `/home/rogelio/src/klibc-0.80/klibc'
gcc -Wp,-MD,./.fork.d -march=i386 -Os -fomit-frame-pointer
-malign-functions=0
-malign-jumps=0 -malign-loops=0 -nostdinc -iwithprefix include
-I../klibc -I../klibc/arch/i386/include -I../klibc/include/bits32
-D__KLIBC__ -DBITSIZE=32 -I../klibc/include -I../linux/include -W
-Wall -Wpointer-arith -Wwrite-strings -Wstrict-prototypes -Winline -c
-o fork.o fork.c...
2000 Jun 17
2
The Oft Maligned comment field, initial thoughts.
Hey all.
Ok, so I'll stand up and be counted a newbie in this list too (just did the
same for the General discussion list). I (once again) read through the
archives, especially the ones concerning the comment field.
First, I'm not a developer, per se. I'm merely an anal-retentive power
user of such things, who likes to have my music archived, and sorted.
In reading through the
2003 Feb 08
0
[Bug 46] New: ..patch-o-matic: nfnetlink_conntrack.c or -.h ... compile failure:
...racking
AssignedTo: laforge@netfilter.org
ReportedBy: arnt@c2i.net
CC: netfilter-buglog@lists.netfilter.org
Hi,
..patch-o-matic: bughunt to try fix nfnetlink_conntrack.c || -.h:
I _think_ I've found the root cause of this compile failure:
cc1: warning: -malign-functions is obsolete, use -falign-functions
In file included from nfnetlink_conntrack.c:44:
/usr/src/linux-2.4.18-24.8.0/include/linux/nfnetlink_conntrack.h:61:
field `proto' has incomplete type
/usr/src/linux-2.4.18-24.8.0/include/linux/nfnetlink_conntrack.h:68:
field `help' has inc...
2004 Aug 20
0
Syslinux 2.11 and gcc 3.4.1
...+++ memdisk/Makefile 2004-08-18 06:34:53.000000000 -0400
@@ -17,11 +17,12 @@
then echo $(1); else echo $(2); fi)
M32 := $(call gcc_ok,-m32,)
+MINLINE := $(call gcc_ok,-minline-all-stringops,)
ALIGN := $(call gcc_ok,-falign-functions=0 -falign-jumps=0
-falign-loops=0,-malign-functions=0 -malign-jumps=0 -malign-loops=0)
CC = gcc $(M32)
CFLAGS = -g -W -Wall -Os -fomit-frame-pointer -march=i386 $(ALIGN) \
- -DVERSION='"$(VERSION)"' -DDATE='"$(DATE)"'
+ $(MINLINE) -DVERSION='"$(VERSION)"' -...
1998 Aug 17
1
Compiling with SCO
Has anybody tried to to compile SAMBA using gcc under SCO unix 5? This
may just be a problem I'm having using the gcc compiler, but I'm having
problems. I would just like to know if anyone's done it, and any special
problems they may have had.
______________________________________________________
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1998 Aug 27
0
precompiled SCO binaries u
...e compiler options for Pentium optimizations and I'm
thinking to compile a version with a pgcc. The compiler is gcc 2.7.2.1.
Here is a snip of Makefile.
# Add any optimisation or debugging flags here
# add -DSYSLOG for syslog support
# FLAGS1 = -O3 -K pentium,noframe
FLAGS1 = -melf -m486 -O2 -malign-loops=4 -malign-jumps=4
-malign-functions=4
LIBS1 =
# Use this for SCO OpenServer 5 with TCB passwords (default) and GCC
# contributed by Scott Michel <scottm@intime.intime.com>
# you may also like to add the -dy switch (recommended by Marnus van
# Niekerk, mvn@pixie.co.za)
CC = gcc
F...
2003 May 18
0
Compile of boot blocks fails, please help.
Hello, I am trying to set a computer running FreeBSD 4.8-STABLE so that it
can boot using a serial console. To this effect I am trying to compile new
boot blocks, but I get this error:
casa# cd /usr/src/sys/i386/boot/biosboot && make
cc -O2 -malign-functions=0 -malign-jumps=0 -malign-loops=0 -DBOOTWAIT=5000
-DTIMEOUT= -DBOOTSEG=0x1000 -DBOOTSTACK=0xFFF0 -Wall -Wredundant-decls
-Wnested-externs -Wstrict-prototypes -Wmissing-prototypes -Wpointer-arith
-Winline -Wcast-qual -fformat-extensions -ansi -DCOMCONSOLE=0x3F8
-DCONSPEED=115200 -mprefe...
1999 Oct 12
3
xmms module update
Since the decoding went so much faster, I actually listened to the song I
encoded all the way to the end, at which point the thing segv'd. Through
a little easter egging, I managed to trace the problem down to a call to
vorbis_dsp_clear(). I've just commented it out in the current source.
As to why it's segving I am uncertain, but, save possible memory leaks,
everything seems to be
2002 Jul 18
1
debian potato cvs wine segfaults on compile
...d)
Nvidia drivers from Nvidias website (libGL 1.3)
I get the following errors, I've tryied to compile this several times with
tools/wineinstall and also 'configure && make depend && make', with and
without these CLFAGS "-O3 -m486 -mcpu=i686 -march=i686 -ffast-math
-malign-double", configure goes thru, make depend goes thru, but it stops
and says Segfault at kernel32.spec.c - everything else (other programs)
compile fine on this box and it is stable..
Here is the tail end of the compile before it stops:
---cut here---
gcc -shared ntdll.spec.o cdrom.o critse...