search for: main_cflags

Dear R-help, Can some one tell me how to profile compiled code dynamically loaded into R? Here's what I tried on our dual Opteron running SUSE Linux Enterprise Server 8 (GCC 3.3): Start with R-patched dated 2004-06-07: (I also had MAIN_CFLAGS="-pg" in config.site.) R is now configured for x86_64-unknown-linux-gnu Source directory: . Installation directory: /usr/local C compiler: gcc -O2 -g -pg -march=k8 -msse2 -m64 C++ compiler: g++ -O2 -g -pg -march=k8 -msse2 -m64 Fortran...

...make > make install > make clean > cd - > # echo "******************************************" > > curl http://cran.r-project.org/src/base/R-2/R-2.15.1.tar.gz -o > R-2.15.1.tar.gz > tar -zxf R-2.15.1.tar.gz > cd R-2.15.1/ > # Tell R where Cairo is > export MAIN_CFLAGS="-I${INSTALL_LOCATION}/include > -I${INSTALL_LOCATION}/cairo/include" > export LDFLAGS="-L${INSTALL_LOCATION}/lib -L${INSTALL_LOCATION}/cairo/lib" > export > PKG_CONFIG_PATH="${PKG_CONFIG_PATH}:${INSTALL_LOCATION}/cairo/lib/pkgconfig:${INSTALL_LOCATION}/lib/pkgc...

I am building from source on RHEL 4 and have run into a problem while running "make check": running code in 'lapack.R' ...make[3]: *** [lapack.Rout] Error 1 make[3]: Leaving directory `/opt/R/R-2.9.1/tests' make[2]: *** [test-Specific] Error 2 make[2]: Leaving directory `/opt/R/R-2.9.1/tests' make[1]: *** [test-all-basics] Error 1 make[1]: Leaving

...aults to "-g -O2" for gcc, and "-g" in all # other cases. CFLAGS="-xO5 -dalign -xlic_lib=sunperf" # The following additional CFLAGS to be used only in the main compilation # and only in building shared libraries respectively. For example, # on some systems one needs MAIN_CFLAGS=-pg when profiling. # MAIN_CFLAGS= # SHLIB_CFLAGS= # Header file search directory (`-IDIR') and any other miscellaneous # options for the C preprocessor and compiler. # If unset defaults to `-I/usr/local/include'. CPPFLAGS="-I/usr/local/include -I/export/home/share/include" #...

...mpilation. ## Use this to specify defines to be used in the compilation of R, ## e.g. -DUSE_TYPE_CHECKING_STRICT ## DEFS= ## The following additional CFLAGS to be used only in the main ## compilation and only in building shared libraries respectively. ## For example, on some systems one needs 'MAIN_CFLAGS=-pg' when ## profiling. ## MAIN_CFLAGS= ## SHLIB_CFLAGS= ## Header file search directory ('-IDIR') and any other miscellaneous ## options (such as defines) for the C preprocessor and compiler. ## If unset defaults to '-I/usr/local/include', with '-I/sw/include' ## prepe...

I am trying to compile R on Linux using SunStudio. Configure flags are mostly as suggested in the R install guide. CC=/opt/sun/sunstudio12.1/bin/suncc CFLAGS="-g -xc99 -xlibmil -xlibmieee" MAIN_CFLAGS=-g SHLIB_CFLAGS=-g CPPFLAGS="-I. -I/opt/sun/sunstudio12.1/prod/include -I/opt/sun/sunstudio12.1/prod/include/cc" CPPFLAGS+="-I/opt/sun/sunstudio12.1/prod/include/cc/sys -I/usr/local/include" F77=/opt/sun/sunstudio12.1/bin/sunf95 FFLAGS="-g -O -libmil " SAFE_FFLAGS=&quo...

...r specified # above. If unspecified, defaults to "-g -O2" for gcc, and "-g" in all # other cases. CFLAGS=-g # The following additional CFLAGS to be used only in the main compilation # and only in building shared libraries respectively. For example, # on some systems one needs MAIN_CFLAGS=-pg when profiling. # MAIN_CFLAGS= # SHLIB_CFLAGS= # Header file search directory (`-IDIR') and any other miscellaneous # options for the C preprocessor and compiler. # If unset defaults to `-I/usr/local/include'. # CPPFLAGS= # The command which runs the the FORTRAN compiler. # If unspeci...

...v_env_FPICFLAGS_set= ac_cv_env_FPICFLAGS_value= ac_cv_env_JAVA_HOME_set= ac_cv_env_JAVA_HOME_value= ac_cv_env_LAPACK_LIBS_set= ac_cv_env_LAPACK_LIBS_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_LIBnn_set= ac_cv_env_LIBnn_value= ac_cv_env_MAIN_CFLAGS_set= ac_cv_env_MAIN_CFLAGS_value= ac_cv_env_MAIN_FFLAGS_set= ac_cv_env_MAIN_FFLAGS_value= ac_cv_env_MAIN_LDFLAGS_set= ac_cv_env_MAIN_LDFLAGS_value= ac_cv_env_MAIN_LD_set= ac_cv_env_MAIN_LD_value= ac_cv_env_MAKE_set= ac_cv_env_MAKE_value= ac_cv_env_OBJCFLAGS_set= ac_cv_env_OBJCFLAGS_value= ac_cv_env...

..._value= ac_cv_env_F2C_set= ac_cv_env_F2C_value= ac_cv_env_F77_set= ac_cv_env_F77_value= ac_cv_env_FFLAGS_set= ac_cv_env_FFLAGS_value= ac_cv_env_FPICFLAGS_set= ac_cv_env_FPICFLAGS_value= ac_cv_env_LAPACK_LIBS_set= ac_cv_env_LAPACK_LIBS_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_MAIN_CFLAGS_set= ac_cv_env_MAIN_CFLAGS_value= ac_cv_env_MAIN_FFLAGS_set= ac_cv_env_MAIN_FFLAGS_value= ac_cv_env_MAIN_LDFLAGS_set= ac_cv_env_MAIN_LDFLAGS_value= ac_cv_env_MAIN_LD_set= ac_cv_env_MAIN_LD_value= ac_cv_env_MAKE_set= ac_cv_env_MAKE_value= ac_cv_env_R_BATCHSAVE_set= ac_cv_env_R_BATCHSAVE_value= ac_cv...

..._env_CXXPICFLAGS_value= ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_F2C_set= ac_cv_env_F2C_value= ac_cv_env_F77_set= ac_cv_env_F77_value= ac_cv_env_FFLAGS_set= ac_cv_env_FFLAGS_value= ac_cv_env_FPICFLAGS_set= ac_cv_env_FPICFLAGS_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_MAIN_CFLAGS_set= ac_cv_env_MAIN_CFLAGS_value= ac_cv_env_MAIN_FFLAGS_set= ac_cv_env_MAIN_FFLAGS_value= ac_cv_env_MAIN_LDFLAGS_set= ac_cv_env_MAIN_LDFLAGS_value= ac_cv_env_MAIN_LD_set= ac_cv_env_MAIN_LD_value= ac_cv_env_MAKE_set= ac_cv_env_MAKE_value= ac_cv_env_R_BATCHSAVE_set= ac_cv_env_R_BATCHSAVE_value= ac_cv...