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2007 Aug 14
0
Limma - 2x2 factorial design matrix
...ileNameCy3Cy5 M6.C6tss37-normnew.gprM6C6 C6.C9tss5-new.gprC6C9 C9.M9tss9-new.gprC9M9 M9.M6tss24-normnew.gprM9M6 C6.M6tss31-normnew.gprC6M6 M6.M9tss2-normnew.gprM6M9 M9.C9tss12-normnew.gprM9C9 C9.C6tss25-normnew.gprC9C6 SlideNumberTreatmentTimeInteraction M6.C6-100 C6.C9010 C9.M9101 M9.M60-1-1 C6.M6100 M6.M9011 M9.C9-10-1 C9.C60-10 According to the design matrix above, may I know what is the meaning of time effect? Does it look at the differential expression of Control sample at different time? How about treatment effect? Is it refer to the differential gene expression for Treated sample at we...