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Dear all, If I have a data frame x<-data.frame(x1=c(1,7),x2=c(4,6),x3=c(8,2)): x1 x2 x3 1 4 8 7 6 2 I want to sort the whole data and get this: x1 1 x3 2 x2 4 x2 6 x1 7 x3 8 If I do sort(X), R reports: Error in order(list(x1 = c(1, 7), x2 = c(4, 6), x3 = c(8, 2)), decreasing = FALSE) : unimplemented type 'list' in 'orderVector1' The only way

Hi netters, Suppose I have two data frames X and Y. X has three colnames A, B and C. Y has three colnames A,B and D. I want to combine them into one matrix, joining the rows having the same A and B values (X$A==Y$A and X$B = Y$B). So the resulting dataframe has four variables/columns: A,B,C and D. I was wondering what's the best way to do it in R. Could anyone give me some advice? Thanks!

Hi netters, I have a matrix X of the size (1000,100). The values are from -3 to +3. When I tried heatmap(X, distfun=function(c),dist(c,method="bin"),hclustfun=function(m),hclust(m,method="average")) I got the error message: Error: evaluation nested too deeply: infinite recursion / options(expressions=)? However, if I used default parameters for distfunction:

Hi, netters, First of all, thanks a lot for all the prompt replies to my earlier question about "merging" data frames in R. Actually that's an equivalence to the "join" clause in mysql. Now I have another question. Suppose I have a data frame X with lots of columns/variables: Name, Age,Group, Type, Salary. I wanna do a subtotal of salaries: aggregate(X$Salary,

hi netters, i have a dataframe A with several columns(variables). the elements of column M are character strings. so A$M=c("ab","abc","bcd","ac","abcd","fg",....."fl"). i wanna extract all the rows where A$M match some regular expression pattern. for a simple example, let the pattern be just "ab", i wanna subset

hi netters, i have a dataframe TEST like this: Y1 Y2 Y3 X1 4 7 8 X2 6 2 Z X3 8 0 1 i would like to change it to a numeric matrix, replacing "Z" with NA Y1 Y2 Y3 X1 4 7 8 X2 6 2 NA X3 8 0 1 i've tried the function data.matrix but it didn't work. is there any easy way to do this? thanks a lot!

Hi netter, Recently I was trying to install rJava. The operating system is suse 10.0, and the R versionis 2.5.0. Following the instructions of R Wiki for rJava, I did configuration first: R CMD javareconf and then it showed a series of information, from what it seems that java is in the system and the configuration succeeded. Then I tried to install rJava:

hi netters Is there a function in R that can compute the quotient and remainder of a division calculation? such that when 11 is given as the dividend and 5 the divider, the function returns 2(quotient) and 1(remainder). Thanks a lot! _________________________________________________________________ 伱佲伔佈佅伮佋佖 MSN Explorer: http://explorer.msn.com/lccn/

hi netters, I'm a newbie to R and there are some very simple problems puzzeled me for two days. I've a dataframe here with several columns different in modes. Two of the columns are special for me: column 1 has the mode "factor" and column 2 has the mode "numeric vectors". The values for column 1 are either "T" or "F". I wanna do two things:

Hi, netters, This is probably a rookie question but I couldn't find the answer after hours of searching and trying. Suppose there'a a dataframe M: x y 10 A 13 B 8 A 11 A I want to locate the rows where x >=10 and y="A". I know how to do it to vectors by using which, but how to do it with the dataframe? Thank you very much! Zhihua Li

Dear netters, suppose I have a matrix X [1,] 'c1' 'r6' '150'[2,] 'c1' 'r4' '70'[3,] 'c1' 'r2' '20'[4,] 'c1' 'r5' '90'[5,] 'c2' 'r2' '20'[6,] 'c3' 'r1' '10'I want to apply some funciton to groups of rows by the first column.If the function is just to

Hi netters, Now I'm connecting from my local windows machine to a remote linux machine and launch R out there using SSH. When I tried to create grahics, like using plot or heatmap, I cannot see the output. Maybe a new R window displaying the graphics has popped out in the remote machine? Or I need to change some settings for the graphics to display? I don't know. I googled it and

Hi, R-users, If I have a data frame like this: >x<-data.frame(g=c("g1","g2","g1","g1","g2"),v=c(1,7,3,2,8)) g v 1 g1 1 2 g2 7 3 g1 3 4 g1 2 5 g2 8 It contains two groups, g1 and g2. Now for each group I want the max v: > aggregate(x$v,list(g=x$g),max) g x 1 g1 3 2 g2 8 Beautiful. But what if I want to keep the row index of (g1

...can learn the bayesian networks structure from training data. But I'm not sure if deal or other similar packages can handle 10000 variables...... Thanks a lot for your information. >From: "Shelby Berkowitz" <berkowi4 at msu.edu> >To: "'zhihua li'" <lzhtom at hotmail.com> >Subject: RE: [R] learning networks with a large number of variables andpre-set parents. >Date: Fri, 25 Mar 2005 10:00:17 -0500 > >It's not really clear to me what it is you're trying to do, how you've >defined links between these variables, or how you...

hi netters Suppose I have a factor X, with 10 elements and 3 levels: A B B C A C B A C C . It is easy to count the number of elements for each level: tapply(X,X,length). Now I have another factor Y, which formed a matrix with X: X| A B B C A C B A C C Y| B B C C C A A A B B I wanna count the number of elements for each of these conditions: when X=A and Y=A; when X=A and Y=B; when X=A and

Hi netters, I'm using the 64-bit R-2.5.0 on a x86-64 cpu, with an RAM of 2 GB. The operating system is SUSE 10. The system information is: -uname -a Linux someone 2.6.13-15.15-smp #1 SMP Mon Feb 26 14:11:33 UTC 2007 x86_64 x86_64 x86_64 GNU/Linux I used heatmap to process a matrix of the dim [16000,100]. After 3 hours of desperating waiting, R told me: cannot allocate vector of size

Hi netters. Assume Y = {Y1,.....Yn} and X = {X1......Xm}, where Yi and Xi are random variables that can take on discrete values from V={0,1,2}. Each Yi in Y has some (0-k) parent variables in X, which means given the values of the parent variables (Xi0....Xik) the values of Yi is set. Yi = F(Xi0,...Xik), where F is a mapping function from parents to sons. Considering there are some noise in

hi netters: I have a series of discrete variables which form a network and I want to learn the network structure from some training data. I could have used packages like deal but there are two problems. First of all, I have 10000 variables. So the possible network structure is awfully huge, I don't know how long it will take my PC to find the highest-scoring network..........maybe a

hi netters, suppose i have a series of objects X1, X2, B1,C1........... they all have the same dimensions. i want to combine into one by using cbind: y<-cbind(X1,X2,B1,C1.....) but i don't want to type the names of these objects one by one. instead, i've put their names into a vector: x<-c("X1","X2","B1","C1",....) i used y<-cbind(x).

Hi all I'm trying to install R 2.3.0 under Suse 10.0. As I'm using SSH to login into the SUSE server, I can't use YAST2, so I have to use rpm -i in the shell. The system tells me that I need some other packages such as xorg-x11-fonts-100dpi, blas, libgfortran.so.0(). Is there some website where I can download and install these packages? Thanks a lot! Zhihua Li