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2018 Mar 21
0
Error in GDCprepare step of TCGAbiolinks
...repare command this same error comes as biomart service is not available. So i had contaced the Biomart people but they said that the Biomart is working fine. below is the complete R code i am usign with the corresponding error, library(TCGAbiolinks) query.exp <- GDCquery(project = "TCGA-LUAD", data.category = "Transcriptome Profiling", data.type = "Gene Expression Quantification", workflow.type = "HTSeq - Counts", experimental.strategy = "RNA-Seq") query...