search for: logbase

Hello, I want to have the x-axis title of my plot in 2 lines, centered: experiment 1: log2(Ratio H/L) I know that in principle that works with '\n'. However, I am also using the 'substitute' command for my axis title. However, it does not make a new line. What I have so far: logbase <- 2 test <- "bait" cellline <- "cellline" plot( log(filteredproteins[["Ratio.H.L.normalized.UW21_FW"]],base=logbase), -log(filteredproteins[["Ratio.H.L.normalized.UW21_REV"]],base=logbase), main= substitute("bait = "* bait *" in &quo...

...journals.sagepub.com/doi/10.1177/0962280213497434>. In this paper, we can fit three models: fit0 <- coxph(Surv(futime, status) ~ x1 + x2 + x3, data = data0) p <- log(predict(fit0, newdata = data1, type = "expected")) lp <- predict(fit0, newdata = data1, type = "lp") logbase <- p - lp fit1 <- glm(y ~ offset(p), family = poisson, data = data1) fit2 <- glm(y ~ lp + offset(logbase), family = poisson, data = data1) group <- cut(lp, c(-Inf, quantile(lp, (1:9) / 10), Inf)) fit3 <- glm(y ~ -1 + group + offset(p), family = poisson, data = data1) Here?I simplely...

...umbers added. I also fixed one error: "y" should be "status". 1. fit0 <- coxph(Surv(futime, status) ~ x1 + x2 + x3, data = data0) 2. p <- log(predict(fit0, newdata = data1, type = "expected")) 3. lp <- predict(fit0, newdata = data1, type = "lp") 4. logbase <- p - lp 5. fit1 <- glm(status ~ offset(p), family = poisson, data = data1) 6. fit2 <- glm(status~ lp + offset(logbase), family = poisson, data = data1) 7. group <- cut(lp, c(-Inf, quantile(lp, (1:9) / 10), Inf)) 8. fit3 <- glm(status ~ -1 + group + offset(p), family = poisson, data...

...uot;,"a3","a3","a3","a3"),f.block=c(1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4,1,2,3,4)) fpl.B.range <- function(lx,logbase,A,B,C,D) { A/(1+logbase^(-B*(lx-C)))+D } myFormula<-list(formula(A~id),formula(B~id),formula(C~id),formula(D~id)) INIT <- c(A.a1=1,A.a2<https://maps.google.com/?q=1,A.a2&entry=gmail&source=g>=0,A.a3=0,B=1,B.a2=0,B.a3=0,C=0,C.a2=0,C.a3=0,D=1,D.a2<https://maps.google.com/?q=1...

...xp(lcl); * ucl=exp(ucl); * pred=exp(pred); if bloom=. then bloom=1; if bloom=0 then chla1=chla; else chla1=.; if bloom=1 then chla2=chla; else chla2=.; run; symbol1 i=none value=plus color=red; symbol2 i=none value=plus color=green; symbol3 i=join value=none line=1 color=black; axis1 logbase=10; axis1; proc gplot data=chla_sep; plot chla2*date=1 chla1*date=2 (ucl pred lcl)*date=3 /overlay vaxis=axis1; by station; run; quit; proc glm data=chla_sep; class station year month; model salinity temperature Transparency__m_ Nitrate__mmol_l_1_ Phosphate__mmol_l_1_ Silicate__mmol_l_1...

...ot;a1","a1","a3","a3","a3","a3","a2","a2","a2","a2","a1","a1","a1","a1","a3","a3","a3","a3")) fpl.B.range <- function(lx,logbase,A,B,C,D) { A/(1+logbase^(-B*(lx-C)))+D } myFormula<-list(formula(A~id),formula(B~id),formula(C~id),formula(D~id)) INIT <- c(A.a1=1,A.a2=0,A.a3=0,B=1,B.a2=0,B.a3=0,C=0,C.a2=0,C.a3=0,D=1,D.a2=0,D.a3=0) for (i in 1:100) { print(paste("Iteration ",i,"...this will stall so...

...&nbsp; topGene(RP.out, cutoff = 0.05, logged = TRUE, logbase = 2, g.names) Table1: Genes called significant under class1 < class2 Table2: Genes called significant under class1 > class2 $Table1 gene.index RP/Rsum FC:(class1/class2) pfp Gen n 51 15.8595 0.8204 0.0000 Gen n-1...

Hi, This is a quiet a specific question, but i really need help. I'm using the flowCore package coming from BioConductor. No i would like to do a transformation, a log tranformation. Although i think i put everything like it should, i get this error: Error in log(x, logbase) : Non-numeric argument to mathematical function which looks like a general calculating problem. the code i use now is the following: logTransi <- truncateTransform("truncate at 1", a=1) testSetLog <- transform(testSet, 'FL10'= logTransi('FL10'), 'FL11'=...

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Hi, I downloaded 3.0.20 from samba.org, ran makepkg.sh to create samba pkg for Solaris. The install base for the new version locates in /opt/samba and the smbd locates in /etc/samba. I tried to modify the makepkg.sh to put everything under /usr/local/samba as follow: Delete: ==== --localstatedir=/var/lib/samba \ --with-piddir=/var/run \

Hi to all! I've set up Zimbra LDAP (2.4) as master, and I want to use RHEL v5 LDAP (2.3) as a slave. This is relevant part of my slapd.conf on LDAP 2.3: # syncrepl directives syncrepl rid=101 provider=ldap://192.168.1.86 bindmethod=simple binddn="uid=zimbra,cn=admins,cn=zimbra" credentials=PASSword searchbase="dc=company,dc=com" schemachecking=on

Hi Guys, We're trying to add a BDC in Samb4 classic domain setup. The Samba 3 How -To and Samb3 by Example covers this but uses the old slapd.conf option, we are using the slapd.d config. I couldn't find a similar document for Samba4 Can you please advise that the following steps will work? LDAP in the existing PDC is working using the smbldap tools - Setup the LDAP in BDC