search for: lmgene

Hi, I'm updating the LMGene package from Bioconductor. "Writing R Extensions" suggests that all source files (the ones in the R directory) have a .R ending, so I added it to the (one) source file. The next time I installed and ran R, R didn't understand any of the functions. I tried various things and eventually...

I am updating the Bioconductor package, LMGene. Thus I am modifying someone else's package, editing or writing new documentation, etc. When I modify the man files in LMGene and install the library, it doesn't change the 'help' that R gives you. The 'help' you actually get in R is the same as before. I haven't been...

...;caMassClass","CGIwithR","CDNmoney","clac","clim.pact","compositions","cyclones","hapassoc","haplo.score","haplo.stats","hapsim","httpRequest", "labdsv","kza","LMGene","Malmig","magic","negenes","oz","papply","spe","wavethresh","waveslim","tdthap") failPackages3 <- c("rcom","Rlsf") #put the 3 sets of rejects together failPackages <- union(f...

I am updating the CRAN package LMGene, and I'm having trouble installing the new version. I changed the working package name to WLMG so I could use the new version without removing the old version from the R directory. I set up R_LIBS to allow installation in a different directory. When I did R CMD INSTALL -l /linux-ws/tilling/Rli...

I have recently upgraded to Ubuntu Gutsy and, for the first time, am using a 64-bit installation. After failing miserably to install R from source, not a problem for me in the past with a 32-bit install, I went the route of using the Debian Etch build. This went smoothly, but I am unable to update my numerous R and BioConductor packages, getting non-zero exit status errors on each package. Is

...t;lars","lasso2","latentnet","lattice","latticeExtra","lazy","ldbounds","ldDesign","LDheatmap","leaps","lgtdl","limma","linprog","lme4","lmeSplines","LMGene","lmm","lmomco","Lmoments","lmtest","locfdr","locfit","lodplot","LogicReg","logistf","logspline","lokern","longitudinal","longmemo","LoopAnalyst","Lo...