search for: llam

...gs="--with-mpi=$prefix --prefix=$prefix CC=mpicc" -l $R_LIBS * Installing *source* package 'Rmpi' ... Try to find mpi.h ... Found in /gcm/home/a347549/local64/include Try to find libmpi or libmpich ... checking for main in -lmpi... yes Try to find liblam ... checking for main in -llam... yes checking for openpty in -lutil... yes checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -I/gcm/home/a347549/local64/lib64/R/include -I/gcm/home/a347549/local64/lib64/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_TAR...

I am just trying to teach myself how to use the mle function in R because it is much better than what is provided in MATLAB. I am following tutorial material from the internet, however, it gives the following errors, does anybody know what is happening to cause such errors, or does anybody know any better tutorial material on this particular subject. >

...ompiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed Try to find mpi.h ... Found in /import/home/u1/uaf/ogorman/lam/include Try to find libmpi.so or libmpich.a checking for main in -lmpi... yes Try to find liblam.so ... checking for main in -llam... yes checking for openpty in -lutil... yes checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -std=gnu99 -I/usr/local/pkg/r/r-2.6.1/lib64/R/include -I/usr/local/pkg/r/r-2.6.1/lib64/R/include -DPACKAGE_NAME=\"\" -D...

Ive tryed this: R CMD INSTALL Rmpi_0.5-2.tar.gz But occurred this error: gcc -shared -L/usr/local/lib64 -o Rmpi.so conversion.o internal.o RegQuery.o Rmpi.o -lmpi -llam -lutil -lpthread -L/usr/local/lib64/R/lib -lR /usr/lib64/gcc-lib/x86_64-suse-linux/3.3.3/../../../../x86_64-suse-linux/bin /ld: /usr/local/lib/libmpi.a(infoset.o): relocation R_X86_64_32 can not be used when making a shared object; recompile with -fPIC /usr/local/lib/libmpi.a: could not read symb...

...-bit HP-Proliant server. I am facing the following error: * Installing *source* package 'Rmpi' ... Try to find mpi.h ... Found in /usr/local/mpich-1.2.7p1/include Try to find libmpi or libmpich ... Found libmpich in /usr/local/mpich-1.2.7p1/lib Try to find liblam ... checking for main in -llam... no liblam not found. Probably not LAM-MPI checking for openpty in -lutil... no checking for main in -lpthread... no configure: creating ./config.status config.status: creating src/Makevars ** libs gcc -I/usr/local/lib64/R/include -I/usr/local/lib64/R/include -DPACKAGE_NAME =\"\" -DPACK...

...o accept ANSI C... none needed checking for pthread_atfork in -lpthread... yes checking for LAM-MPI... checking LAM-MPI Libraries at /usr/lib/lam... configure: LAM-MPI lib detected @ /usr/lib/lam.. Configured Parameters ... LIBS = -lscalapack -lblacsF77init -lblacsCinit -lblacs -lf77blas -latlas -llamf77mpi -lmpi -llam -lpthread LDFLAGS = -L/usr/lib -L/usr/lib -L/usr/lib/lib -L/usr/lib/lam/lib CFLAGS = -I/usr/lib/lam/include -g -O2 -std=gnu99 PALIBS = -lmpi -llam -lpthread ... *** ... configure: creating ./config.status config.status: creating src/Makefile configure: creating ./config.status co...

Dear R Gurus: Is there a problem with Rmpi on x86 with SUSE 10.1, please? I've tried everything and it still won't load. Has anyone else dealt with this please? Thanks, Edna Bell

Hi R people: I installed R-2.6.0 on a Red Hat Linux system and am now trying to install the Rmpi package. The installation cannot seem to find the mpi.h file, even though it exists. Is there a variable that I should be exporting into the process, please? Thanks in advance, Sincerely, Erin Hodgess mailto: hodgess at gator.uhd.edu

...;\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/lib/lam/include -DMPI2 -DLAM -I/usr/local/include -fpic -g -O2 -c internal.c -o internal.o gcc -std=gnu99 -shared -L/usr/local/lib64 -o Rmpi.so RegQuery.o Rmpi.o conversion.o internal.o -L/usr/lib/lam/lib -lmpi -llam -lutil -lpthread /usr/bin/ld: skipping incompatible /usr/lib/lam/lib/libmpi.so when searching for -lmpi /usr/bin/ld: skipping incompatible /usr/lib/lam/lib/libmpi.a when searching for -lmpi /usr/bin/ld: cannot find -lmpi collect2: ld returned 1 exit status make: *** [Rmpi.so] Error 1 ERROR: compila...

...quot; -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/usr/local/lam-mpi/include -DMPI2 -I/usr/local/include -fpic -g -O2 -std=gnu99 -c internal.c -o internal.o gcc -shared -L/usr/local/lib -o Rmpi.so RegQuery.o Rmpi.o conversion.o internal.o -L/usr/local/lam-mpi/lib -lmpi -llam /usr/lib/gcc-lib/ia64-suse-linux/3.3.3/../../../../ia64-suse-linux/bin/ld: /usr/local/lam-mpi/lib/libmpi.a(laminit.o): @gprel relocation against dynamic symbol lam_comms /usr/lib/gcc-lib/ia64-suse-linux/3.3.3/../../../../ia64-suse-linux/bin/ld: /usr/local/lam-mpi/lib/libmpi.a(laminit.o): @gprel rel...

...-DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -I/home/faculty/hodgess/include -DMPI2 -fPIC -I/usr/local/include -fpic -g -O2 -c Rmpi.c -o Rmpi.o gcc -std=gnu99 -shared -L/usr/local/lib -o Rmpi.so conversion.o internal.o RegQuery.o Rmpi.o -L/home/faculty/hodgess/lib -lmpich -llam -lpthread -fPIC ** R ** demo ** inst ** preparing package for lazy loading ** help >>> Building/Updating help pages for package 'Rmpi' Formats: text html latex example hosts text html latex internal text ht...

Buenos días. Quiero hacer un for (j), anidado en otro for (i). En el 2º for, en cada iteración ha de crear una matriz vacía: mat <- matrix(nrow=nrow(data),ncol=19) pero llamándola de forma distinta cada vez. El nombre ha de ser: paste("D",i,colnames(Data[j]),sep=""). Llevo un rato haciendo pruebas pero no me sale. A ver si alguien pudiera ayudarme, gracias, Manuel . -- Dr Manuel Mendoza Department of Biogeography an...

...or strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking mpi.h usability... yes checking mpi.h presence... yes checking for mpi.h... yes Try to find libmpi ... checking for main in -lmpi... yes Try to find liblam ... checking for main in -llam... no liblam not found. Probably not LAM-MPI checking for openpty in -lutil... yes checking for main in -lpthread... yes configure: creating ./config.status config.status: creating src/Makevars config.status: creating R/zzz.R ** libs gcc -I/usr/lib/R/include -DPACKAGE_NAME=\"\" -DPACKAGE_...