search for: libs_only

...dependencies = NA, type = getOption("pkgType"), configure.args = getOption("configure.args"), configure.vars = getOption("configure.vars"), clean = FALSE, Ncpus = getOption("2", 1L), libs_only = FALSE, INSTALL_opts,--verbose) and this is the result stats [ ~ ]# export DIR=/home/stats/R-2.15.0_runTEST190712A stats [ ~ ]# export DEST=/home/stats/Rtester stats [ ~ ]# cd $DEST stats [ ~/Rtester ]# stats [ ~/Rtester ]# ${DIR}/bin/R install.packages(MASS_7.3-17.tar.gz, ${DEST}, repos = get...

....loc = libpath, fields = c("Package", "Version")) 5: getDependencies(pkgs, dependencies, available, lib) 4: .install.winbinary(pkgs = pkgs, lib = lib, contriburl = contriburl, method = method, available = available, destdir = destdir, dependencies = dependencies, libs_only = libs_only, ...) 3: install.packages(pkgs = pkgs, repos = repos, ...) at biocinstall.R#205 2: biocinstall(pkgs = pkgs, groupName = groupName, ...) at biocLite.R#5 1: biocLite("Biobase") It doesn't matter if I use biocLite, or just install.packages(), I get the same error. I did a r...

...;), configure.args = getOption("configure.args"), configure.vars = getOption("configure.vars"), clean = FALSE, Ncpus = getOption("Ncpus", 1L), verbose = getOption("verbose"), libs_only = FALSE, INSTALL_opts, quiet = FALSE, keep_outputs = FALSE, ...) ... Arguments to be passed to download.file or to the functions for binary installs on OS X and Windows (which accept an argument "lock": see the section on ?Locking?). ############################# Since...

...type = > > getOption("pkgType"), configure.args = > > getOption("configure.args"), configure.vars = > > getOption("configure.vars"), clean = FALSE, Ncpus = > > getOption("Ncpus", 1L), verbose = getOption("verbose"), > > libs_only = FALSE, INSTALL_opts, quiet = FALSE, > > keep_outputs = FALSE, ...) { [...] > > > > So if you use Install/Update in the Packages tab of > > RStudio and do not experience the behaviour you are > > expecting, it is something that you need to discuss with > > Posit...

Hi again, following my previous post on RCurl, I cannot install Rcpp either: g++ -m32 -I/home/renaud/bin/R/2.15/lib64/R/include -I/home/renaud/bin/R/2.15/lib64/R/include/i386 -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c r_cast.cpp -o r_cast.o g++ -m32 -shared -L/usr/local/lib64 -o Rcpp.so Date.o DateVector.o Datetime.o DatetimeVector.o Dimension.o DottedPair.o

Hi again, following my previous post on RCurl, I cannot install Rcpp either: g++ -m32 -I/home/renaud/bin/R/2.15/lib64/R/include -I/home/renaud/bin/R/2.15/lib64/R/include/i386 -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c r_cast.cpp -o r_cast.o g++ -m32 -shared -L/usr/local/lib64 -o Rcpp.so Date.o DateVector.o Datetime.o DatetimeVector.o Dimension.o DottedPair.o

...d was superseded by the Depends field of the DESCRIPTION file long ago.) ? R CMD check --no-latex is deprecated in favour of --no-manual. ? R CMD Sd2Rd is formally deprecated and will be removed in R 2.13.0. PACKAGE INSTALLATION: ? install.packages() has a new argument libs_only to optionally pass --libs-only to R CMD INSTALL and works analogously for Windows binary installs (to add support for 64- or 32-bit Windows). ? When sub-architectures are in use, the installed architectures are recorded in the Archs field of the DESCRIPTION file. There...

...d was superseded by the Depends field of the DESCRIPTION file long ago.) ? R CMD check --no-latex is deprecated in favour of --no-manual. ? R CMD Sd2Rd is formally deprecated and will be removed in R 2.13.0. PACKAGE INSTALLATION: ? install.packages() has a new argument libs_only to optionally pass --libs-only to R CMD INSTALL and works analogously for Windows binary installs (to add support for 64- or 32-bit Windows). ? When sub-architectures are in use, the installed architectures are recorded in the Archs field of the DESCRIPTION file. There...