Displaying 16 results from an estimated 16 matches for "libmkl_core".
2009 Mar 16
6
R with MKL
Hi,
I have seen a lot of problems from people trying to compile R with
MKL. So I am writing my experience in case it helps and to ask one
question. I installed R-2.8.1.patched in Ubuntu 9.04 (gcc 4.3.3) using
MKL 10.1.1.019.
I configured correctly (following MKL userguide) with :
sudo ./configure --with-blas="-I/opt/intel/mkl/10.1.1.019/include
-L/opt/intel/mkl/10.1.1.019/lib/em64t
2009 Mar 16
6
R with MKL
Hi,
I have seen a lot of problems from people trying to compile R with
MKL. So I am writing my experience in case it helps and to ask one
question. I installed R-2.8.1.patched in Ubuntu 9.04 (gcc 4.3.3) using
MKL 10.1.1.019.
I configured correctly (following MKL userguide) with :
sudo ./configure --with-blas="-I/opt/intel/mkl/10.1.1.019/include
-L/opt/intel/mkl/10.1.1.019/lib/em64t
2008 Apr 18
1
configure can't find dgemm in MKL10
...-Wl,--start-group /usr1/util/Intel/mkl/10.0.1.014/lib/em64t/libmkl_gf_lp64.a /usr1/util/Intel/mkl/10.0.1.014/lib/em64t/libmkl_gnu_thread.a /usr1/util/Intel/mkl/10.0.1.014/lib/em64t/libmkl_core.a -Wl,--end-group -liomp5 -lguide -lpthread -lgomp... no
checking for dgemm_... no
checking for ATL_xerbla in -latlas... yes
checking for dgemm_ in -lf77blas... no
checking for dgemm_ in -lblas... yes
checking for dgemm_ in -ldgemm...
2012 Aug 21
1
make check fails two tests on RHEL 6 build
I am installing R 2.15.1 onto RHEL 6, using gcc 4.7.0 with Intel MKL
10.3.7 and the following environment:
export BLAS_LIBS="-Wl,--start-group
/usr/caen/intel-12.1/mkl/lib/intel64/libmkl_gf_lp64.a
/usr/caen/intel-12.1/mkl/lib/intel64/libmkl_sequential.a
/usr/caen/intel-12.1/mkl/lib/intel64/libmkl_core.a -Wl,--end-group
-lpthread"
export LAPACK_LIBS="-Wl,--start-group
/usr/caen/intel-12.1/mkl/lib/intel64/libmkl_gf_lp64.a
/usr/caen/intel-12.1/mkl/lib/intel64/libmkl_sequential.a
/usr/caen/intel-12.1/mkl/lib/intel64/libmkl_core.a -Wl,--end-group
-lpthread"
./configure --prefix=/home...
2012 Oct 19
0
--enable-R-shlib and external BLAS/LAPACK libraries
...p64.so => /cluster/software/VERSIONS/intel-2011.10/composer_xe_2011_sp1/mkl/lib/intel64/libmkl_intel_lp64.so (0x00007ff5292b7000)
libmkl_intel_thread.so => /cluster/software/VERSIONS/intel-2011.10/composer_xe_2011_sp1/mkl/lib/intel64/libmkl_intel_thread.so (0x00007ff528238000)
libmkl_core.so => /cluster/software/VERSIONS/intel-2011.10/composer_xe_2011_sp1/mkl/lib/intel64/libmkl_core.so (0x00007ff5271c2000)
libiomp5.so => /cluster/software/VERSIONS/intel-2011.10/composer_xe_2011_sp1/lib/intel64/libiomp5.so (0x00007ff526ecf000)
libgcc_s.so.1 => /lib64/libgcc_s...
2012 Sep 21
0
--enable-R-shlib and external BLAS/LAPACK libraries
...p64.so => /cluster/software/VERSIONS/intel-2011.10/composer_xe_2011_sp1/mkl/lib/intel64/libmkl_intel_lp64.so (0x00007ff5292b7000)
libmkl_intel_thread.so => /cluster/software/VERSIONS/intel-2011.10/composer_xe_2011_sp1/mkl/lib/intel64/libmkl_intel_thread.so (0x00007ff528238000)
libmkl_core.so => /cluster/software/VERSIONS/intel-2011.10/composer_xe_2011_sp1/mkl/lib/intel64/libmkl_core.so (0x00007ff5271c2000)
libiomp5.so => /cluster/software/VERSIONS/intel-2011.10/composer_xe_2011_sp1/lib/intel64/libiomp5.so (0x00007ff526ecf000)
libgcc_s.so.1 => /lib64/libgcc_s...
2015 Sep 02
4
Build R with MKL and ICC
...00007f438e8dc000)
-----------------------------------------------------------------------------------------------
Now a few questions:
1- am I not supposed to see something like this in the ldd command return?
libmkl_intel_lp64.so => /opt/intel....
libmkl_intel_thread.so => /opt/intel/....
libmkl_core.so => /opt/intel/...
Or do I need to run $make install before ldd?
2- when visiting Intel MKL link advisor[0], here is what I get as
configure and make options:
Linking: -L${MKLROOT}/lib/intel64 -lmkl_intel_ilp64 -lmkl_core
-lmkl_intel_thread -lpthread -lm
Compiler options: -DMKL_ILP64 -qopen...
2023 Feb 01
2
dyn.load(now = FALSE) not actually lazy?
...1 (0x00007f8cb1a19000)
libgcc_s.so.1 =>
/stornext/System/data/apps/gcc/gcc-11.2.0/lib64/libgcc_s.so.1
(0x00007f8cb1801000)
libdl.so.2 => /lib64/libdl.so.2 (0x00007f8cb15fd000)
libmkl_intel_lp64.so.2 => not found
libmkl_gnu_thread.so.2 => not found
libmkl_core.so.2 => not found
libm.so.6 => /lib64/libm.so.6 (0x00007f8cb12fb000)
libcudart.so.11.0 => not found
Then in R, if I try to load that same file:
>
dyn.load("/stornext/System/data/nvidia/libtorch-gpu/libtorch-gpu-1.12.1/lib/libtorch_cpu.so",
now=FALSE)
Error in...
2015 Sep 04
2
Build R with MKL and ICC
...--------------------------------------------------------------------------------------
> >
> >
> > Now a few questions:
> >
> EDIT
> > 1- am I not supposed to see these libraries in the list ?
> > libmkl_intel_lp64.so
> > libmkl_intel_thread.so
> > libmkl_core.so
You are looking in the wrong place. With the option --enable-BLAS-shlib,
R is linked to MKL via the library libRblas.so which you will find in
the directory "lib" after building R.
> > Or do I need to run $make install before ldd?
> >
> > 2- when visiting Intel MKL...
2015 Sep 04
1
Build R with MKL and ICC
...uot;
export FCFLAGS="$fast -fp-model precise"
./configure --prefix=$destdir --with-blas='-mkl=parallel' --with-lapack
--enable-BLAS-shlib
Thank you for this configuration. Nothing about openmp?
What about my cited missing librairies.
libmkl_intel_lp64.so
libmkl_intel_thread.so
libmkl_core.so
Any idea why they are not listed by the ldd command?
## Notes (they might not be true anymore):
## -static and -ipo break compilation
## -no-prec-div breaks make check
## -fp-model precise is needed for make check
## -wd188 removes a lot of warnings (see R Inst. & Adm. manual)
We have suc...
2015 Sep 02
0
Build R with MKL and ICC
...dc++.so.6 (0x00007f438e8dc000)
> -----------------------------------------------------------------------------------------------
>
>
> Now a few questions:
>
EDIT
> 1- am I not supposed to see these libraries in the list ?
> libmkl_intel_lp64.so
> libmkl_intel_thread.so
> libmkl_core.so
>
> Or do I need to run $make install before ldd?
>
> 2- when visiting Intel MKL link advisor[0], here is what I get as
> configure and make options:
> Linking: -L${MKLROOT}/lib/intel64 -lmkl_intel_ilp64 -lmkl_core
> -lmkl_intel_thread -lpthread -lm
> Compiler options: -...
2015 Sep 05
0
Build R with MKL and ICC
...--------------------------------------------------
>> >
>> >
>> > Now a few questions:
>> >
>> EDIT
>> > 1- am I not supposed to see these libraries in the list ?
>> > libmkl_intel_lp64.so
>> > libmkl_intel_thread.so
>> > libmkl_core.so
>
> You are looking in the wrong place. With the option --enable-BLAS-shlib,
> R is linked to MKL via the library libRblas.so which you will find in
> the directory "lib" after building R.
Right.
$ ls lib
libRblas.so* libRlapack.so* libR.so*
$ ldd bin/exec/R returns
.....
2008 Nov 04
2
Building with MKL on Ubuntu
Hi all,
I'm trying to build R from subversion with MKL 10.0.2 on Ubuntu. I tried:
./configure --with-blas='-L/opt/intel/mkl/10.0.2.018/lib/em64t -lmkl
-lguide' --with-lapack='/opt/intel/mkl/10.0.2.018/lib/em64t -lmkl
-lmkl_lapack' --enable-R-shlib
and got:
R is now configured for x86_64-unknown-linux-gnu
Source directory: .
Installation directory: /usr/local
2008 Nov 04
2
Building with MKL on Ubuntu
Hi all,
I'm trying to build R from subversion with MKL 10.0.2 on Ubuntu. I tried:
./configure --with-blas='-L/opt/intel/mkl/10.0.2.018/lib/em64t -lmkl
-lguide' --with-lapack='/opt/intel/mkl/10.0.2.018/lib/em64t -lmkl
-lmkl_lapack' --enable-R-shlib
and got:
R is now configured for x86_64-unknown-linux-gnu
Source directory: .
Installation directory: /usr/local
2015 Sep 07
2
Build R with MKL and ICC
...-----
> >> >
> >> >
> >> > Now a few questions:
> >> >
> >> EDIT
> >> > 1- am I not supposed to see these libraries in the list ?
> >> > libmkl_intel_lp64.so
> >> > libmkl_intel_thread.so
> >> > libmkl_core.so
> >
> > You are looking in the wrong place. With the option --enable-BLAS-shlib,
> > R is linked to MKL via the library libRblas.so which you will find in
> > the directory "lib" after building R.
>
>
> Right.
> $ ls lib
> libRblas.so* libRlapa...
2008 Jan 25
4
Problem building R with Intel MKL v10 BLAS
NO
Hi. I'm not sure if this is an R-help or R-devel problem, so I'm
starting here in the hope that someone can help (and willing to go to
the other list if it's more appropriate). I think I am following all of
the instructions in the various manuals, but clearly I am missing something.
I have an Intel EM64T Dell with 2 dual-core Xeon processors running Red
Hat EL5. I would