search for: libblas3gf

Displaying 10 results from an estimated 10 matches for "libblas3gf".

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2012 Oct 13
0
[R-sig-hpc] Debian/Ubuntu + threaded BLAS/ATLAS (solved)
...alled > fakeroot debian/rules custom > > That will give you (after a long while) a bunch of libatlas*.deb files > that you can easily install with sudo dpkg -i > > I tried following these instructions with ATLAS 3.8.4-8 on Ubuntu 12.04, got the .deb files, but I get conflicts with libblas3gf (see below), any ideas? Thanks, Gad $ sudo dpkg -i *.deb dpkg: regarding libatlas3-base_3.8.4-8ubuntu1+custom2_amd64.deb containing libatlas3-base: libatlas3-base breaks libblas3gf (<< 1.2.20110419-3) libblas3gf (version 1.2.20110419-2ubuntu1) is present and installed. dpkg: error proces...
2013 Jun 07
1
Function nlme::lme in Ubuntu (but not Win or OS X): "Non-positive definite approximate variance-covariance"
Dear all, I am estimating a mixed-model in Ubuntu Raring (13.04¸ amd64), with the code: fm0 <- lme(rt ~ run + group * stim * cond, random=list( subj=pdSymm(~ 1 + run), subj=pdSymm(~ 0 + stim)), data=mydat1) When I check the approximate variance-covariance matrix, I get: > fm0$apVar [1] "Non-positive definite
2008 Nov 14
1
Bug#505698: r-base-core: dev2bitmap fails with gsexe related error (PR#13288)
...6_64) | | Kernel: Linux 2.6.26-1-amd64 (SMP w/2 CPU cores) | Locale: LANG=it_IT.UTF-8, LC_CTYPE=it_IT.UTF-8 (charmap=UTF-8) | Shell: /bin/sh linked to /bin/dash | | Versions of packages r-base-core depends on: | ii libatlas3gf-base [libl 3.6.0-22 Automatically Tuned Linear Algebra | ii libblas3gf [libblas.so 1.2-2 Basic Linear Algebra Subroutines 3 | ii libc6 2.7-16 GNU C Library: Shared libraries | ii libcairo2 1.6.4-6.1 The Cairo 2D vector graphics libra | ii libgfortran3 4.3.2-1 Runtime library for GNU Fo...
2011 Jun 06
1
Lapack or Blas crashing R when using "large" matrices (Ubuntu 11.04)
Hello, This simple SVD calculation (commands are copied immediately below) crashes on my Ubuntu machine (R 2.13.0). However it worked fine with R.12 and Ubuntu 10.04, and it also works fine on my Windows 7 machine with R 2.13, so I suspect there's a problem with (my?) Ubuntu and / or R. I'm using the R distribution that is accessible with Ubuntu's repositories manager, I am not
2010 Apr 09
2
problems loading blas with R 2.11.0~20100402-1
Hi, Since upgrading to version 2.11.0~20100402-1, starting R fails with: /usr/lib64/R/bin/exec/R: error while loading shared libraries: libblas.so.3gf: cannot open shared object file: No such file or directory Is this occurring to others on sid? -- Seb
2012 Mar 15
0
[R-sig-hpc] Debian/Ubuntu + threaded BLAS/ATLAS (solved)
...dpkg -f /var/spool/atlas39/libatlas39_3.9.25-1_amd64.deb Package: libatlas39 Source: atlas39 Version: 3.9.25-1 Architecture: amd64 Maintainer: Dirk Eddelbuettel <edd at debian.org> Installed-Size: 22656 Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libgfortran3 (>= 4.3) Suggests: libblas3gf, liblapack3gf Provides: libatlas.so.3gf, libblas.so.3gf, liblapack.so.3gf Section: libs Priority: optional Homepage: http://math-atlas.sourceforge.net/ Description: Automatically Tuned Linear Algebra Software, version 3.9.25 ATLAS is an approach for the automatic generation and optimization of nu...
2011 Dec 05
1
Illegal operation with lm on Debian Sid, PowerPC architecture
Hello all: (First of all, sorry for my very bad english) I came from R-help-es with this problem, they say me this is a better place to find a solution, I hope that. I try to use lm function, then R exploit. After I cleaned my code without success I try the basic: open R (try on console and Rkward) and run lm examples, this is the output: ---------- console cut ------------------- R version
2011 Sep 14
3
make check reg-tests-1b.R fails with Ubuntu R
Today I built R from source on a 32-bit Ubuntu 10.04.3 LTS box, and saw that the "make check" tests/reg-tests-1b.R failed. From the output at the end of my "tests/reg-tests-1b.Rout.fail" file, the problem is appearing in the "identical(z, x %*% t(y))" test code below. I then tried the stock R provided by the Ubuntu r-base-core binary package, and to my surprise, it
2010 Jun 12
1
sharing experience - installing R Spatial Views
...tonGeostats.cpp:1: optimisation/ModelTrainer.h:43: error: `eps' was not declared in this scope optimisation/ModelTrainer.h:47: error: `itpp' is not a namespace-name .. .. .. make: *** [astonGeostats.o] Error 1 ERROR: compilation failed for package ?psgp? solved: apt-get install libblas-dev libblas3gf liblapack-dev liblapack3gf libfftw3-3 libfftw3-dev apt-get install libitpp-dev libitpp6gf ================================================================================================ gcc34 script: #/bin/sh mkdir DELEME && cd DELEME && wget http://ge.archive.ubuntu.com/ubuntu/...
2011 Dec 04
6
Problema (¿bicho?) en función lm, R 2.14.0
Hola: Al tratar de utilizar la función lm R explota, no se si se trata de un problema de mi máquina o me he dado de bruces con un bicho. Después de intentar depurar mi código he probado lo más básico, abrir R (probado en consola y Rkward) y lanzar los ejemplos de lm, esto es lo que me encuentro: ---------- Corte desde la consola ------------------- R version 2.14.0 (2011-10-31) Copyright (C)