search for: ldhs

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2012 Sep 25
1
REML - quasipoisson
...{ S[i,j]=S1[i-1,j-1] S[i+9,j+9]=S2[i-1,j-1] } } beta<-m1$coef #penalised deviance Dp<-m1$dev+t(beta)%*%S%*%beta F1<-Dp/(2*phi) #2nd term F2<-sum(ifelse(y==0,0,y*log(y)-y-log(factorial(y)))) #3rd term X<-predict(m1,type="lpmatrix") W<-diag(fitted(m1)) H<-t(X)%*%W%*%X ldhs<-determinant(H+S,log=TRUE)$modulus[1] eigS<-eigen(S,only.values=TRUE)$val lds<-sum(log(eigS[1:16])) F3<-(ldhs-lds)/2 #4th term Mp=3 F4<-Mp/2*log(2*pi*phi) F1-F2+F3-F4 m1$gcv #reml score = formula ##quasipoisson with scale = 1 #fitting is identical to the poisson case #F1, F3, and...
2012 Oct 01
0
[Fwd: REML - quasipoisson]
...1$coef > #penalised deviance > Dp<-m1$dev+t(beta)%*%S%*%beta > F1<-Dp/(2*phi) > > #2nd term > F2<-sum(ifelse(y==0,0,y*log(y)-y-log(factorial(y)))) > > #3rd term > X<-predict(m1,type="lpmatrix") > W<-diag(fitted(m1)) > H<-t(X)%*%W%*%X > ldhs<-determinant(H+S,log=TRUE)$modulus[1] > eigS<-eigen(S,only.values=TRUE)$val > lds<-sum(log(eigS[1:16])) > F3<-(ldhs-lds)/2 > > #4th term > Mp=3 > F4<-Mp/2*log(2*pi*phi) > > F1-F2+F3-F4 > m1$gcv > #reml score = formula > > ##quasipoisson with sca...