search for: labels2colors

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2010 Aug 06
1
Grouping clusters from dendrograms
...g to visualise the data which may be incorrect. The script I tried was: > dendro<-hclust(as.dist(combo2),method="average") > cut2<-cutreeDynamicTree(dendro,maxTreeHeight=1,deepSplit=TRUE,minModuleSize=1) I then used the following to visualise the data: > cut2colour<-labels2colors(cut2) > plotDendroAndColors(dendro,cut2colour,"Dynamic Tree Cut", > dendroLabels=FALSE,hang=0.03,addGuide=TRUE,guideHang=0.05) Any advice or ideas would be much appreciated! Thanks, Julia -- View this message in context: http://r.789695.n4.nabble.com/Grouping-clusters-from-dendr...