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2009 Jun 15
0
heatmap.2 questions
...as it comes out from the code
above, and the other ("...copy.png") being how I would actuallt like it to
look. I adjusted the levels in photoshop to get this second image.
The data is log2 scale gene expression data (single channel), and scaled
with this command:
L3data_med<- scale(t(L3dataonly), center = TRUE)
> L3data_med2<-t(L3data_med)
>
...to median (mean?) centre the rows, prior to clustering.
Thanks in advance,
Ryan
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2009 Jun 15
0
books on Time serie
...he other ("...copy.png") being how I would actuallt like
> it to
> look. I adjusted the levels in photoshop to get this second image.
>
> The data is log2 scale gene expression data (single channel), and
> scaled
> with this command:
>
> L3data_med<- scale(t(L3dataonly), center = TRUE)
>> L3data_med2<-t(L3data_med)
>>
>
> ...to median (mean?) centre the rows, prior to clustering.
>
> Thanks in advance,
>
> Ryan
> <heatmap.png><heatmap copy.png>
>
>
>
> _______________________________________________
&g...