search for: knowngen

Need way to resize an existing graphics window. This should be applicable across platforms (as part of a package). Context: function1() draws main plot (I'm using grid), function2() adds smaller plot above main plot, but this one can sometimes overflow the original graphics window area. Thanks, Sigal

...u95av2cdf?, ?SNPlocs.Hsapiens.dbSNP.20100427?, ?SNPlocs.Hsapiens.dbSNP.20101109?, ?SNPlocs.Hsapiens.dbSNP.20110815?, ?SNPlocs.Hsapiens.dbSNP141.GRCh38?, ?XtraSNPlocs.Hsapiens.dbSNP141.GRCh38?, ?org.Sc.sgd.db?, ?org.Mm.eg.db?, ?org.At.tair.db?, ?hom.Hs.inp.db?, ?GO.db?, ?TxDb.Hsapiens.UCSC.hg18.knownGene?, ?TxDb.Hsapiens.UCSC.hg19.knownGene?, ?TxDb.Hsapiens.UCSC.hg38.knownGene?, ?TxDb.Mmusculus.UCSC.mm9.knownGene?, ?TxDb.Mmusculus.UCSC.mm10.knownGene?, ?TxDb.Dmelanogaster.UCSC. [... truncated] 2: In install.packages(pkgs = doing, lib = lib, ...) : installation of package ?humanStemCell? ha...

...ot;) library("GenomicFeatures") #extract the alignments which match real genes #(add this onto stefans script … req to buid the gr object using the regions from the BSgenome alignment of the 100bp seqs.) txdb <- makeTranscriptDbFromUCSC(genome = "hg19", tablename = "knownGene") ## do once locally & save #query.plus <- DNAString("DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD") # 100bp C free sequence query.plus <- DNAString("DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD...