search for: kinmat

Hello, All, GWAF 1.2 R.Version() is below. system(lme.batch.imputed( phenfile = 'phenfile.csv', genfile = 'CARe_imputed_release.0.fhsR.gz', pedfile='pedfile.csv', phen='phen1', covar=c('covar1','covar2'), kinmat='imputed_fhs.kinship.RData', outfile='imputed.FHS.IBC.GWAF.LME.output.0.txt' )) Gives the error messages: Error in coxme.varcheck(ncluster, varlist, n, gvars, groups, sparse, rescale, : object 'kmat' not found Error in lme.cov.out$theta : $ operator is invalid for atomi...