search for: kinfit

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2012 Sep 06
1
How to extract p value from the lmekin object obtained by fitting mixed model with function lmekin() in package coxme?
...ly using lmekin() function in coxme package to fit a mixed effect model for family based genetic data. How can I extract the p value from a lmekin object? When I print the object in R console, I can see the p value and Z value are just over there. But I can not extract them by the coef() function. kinfit$coefficient$fixed (kinfit is the name of the lmekin object) just include the intercept and the value of fixed effects. Where are p and Z values? Thank you! -- Tianxiao "Joshua" Zhang, Ph.D. student Human and Statistical Genetics Program Division of Biology and Biomedical Sciences...
2012 Sep 06
0
p value from lmekin()
...nction in coxme package to fit a > mixed effect model for family based genetic data. How can I extract the p > value from a lmekin object? When I print the object in R console, I can > see the p value and Z value are just over there. But I can not extract them > by the coef() function. kinfit$coefficient$fixed (kinfit is the name of the > lmekin object) just include the intercept and the value of fixed effects. > Where are p and Z values? > > Thank you! > Similar to lme and lmer, lmekin and coxme have fixef(fit) returns the coefficients of the fixed effects vcov...
2010 Jul 18
6
CRAN (and crantastic) updates this week
...cutoff and associated analyses for statistical populations * iCluster (1.2.0) Ronglai Shen http://crantastic.org/packages/iCluster Integrative clustering of multiple genomic data types using a joint latent variable model with application to breast and lung cancer subtype analysis. * kinfit (1.0) Johannes Ranke http://crantastic.org/packages/kinfit Simple calculation routines based on the FOCUS Kinetics Report (2006) * kml3d (0.1) Christophe M. Genolini http://crantastic.org/packages/kml3d KmL3D is an implementation of k-means specificaly design to deal with joint lon...