Displaying 1 result from an estimated 1 matches for "kfit2kfit2".
2012 Nov 24
1
Bootstrap lmekin model
...e heritability. I want to estimate the confidence interval of the variance coefficient and so I should use a bootstrap simulation. The pedigree file has 1386 subjects so I create a kinship matrix [1386*1386].This is the code of R I use:
kfit2 <- lmekin(IT~1+AGE +(1|ID), dati1, varlist=list(kmat))kfit2kfit2$vcoef
library(boot)
var <- function(formula,data,indices,varlist) { d <- data[indices,] # allows boot to select sample kfit2 <- lmekin(formula, data=d, varlist=list(kmat)) return(kfit2$vcoef)}
# bootstrapping with 1000 replications results <- boot(data=dati1, statistic=var, R...