search for: kbroman

Hi folks, Debian 504 64-bit I found following document; http://www.biostat.wisc.edu/~kbroman/Rintro/ Whether it is the right document for installing Emacs+ESS and R so that R can run on Emacs? TIA B.R. Stephen L

Greetings. The group that I work with has just started using the approach outlined in Karl Broman's handy primer: http://kbroman.org/pkg_primer/pages/vignettes.html to create vignettes for a couple of R packages. This works fine as long as we have a current Rmd version of the vignette. But we have some old PDF documents that we'd like to include as vignettes as well. I'd like to know if there's a way to includ...

...mail.com>> wrote: >>> On 18/02/2018 9:06 PM, Michael Hannon wrote: >>>> >>>> Greetings. The group that I work with has just started using the approach >>>> outlined in Karl Broman's handy primer: >>>> >>>> http://kbroman.org/pkg_primer/pages/vignettes.html <http://kbroman.org/pkg_primer/pages/vignettes.html> >>>> >>>> to create vignettes for a couple of R packages. >>>> >>>> This works fine as long as we have a current Rmd version of the vignette. >>>...

...018 at 1:20 AM, Duncan Murdoch <murdoch.duncan at gmail.com> wrote: > On 18/02/2018 9:06 PM, Michael Hannon wrote: >> >> Greetings. The group that I work with has just started using the approach >> outlined in Karl Broman's handy primer: >> >> http://kbroman.org/pkg_primer/pages/vignettes.html >> >> to create vignettes for a couple of R packages. >> >> This works fine as long as we have a current Rmd version of the vignette. >> But >> we have some old PDF documents that we'd like to include as vignettes as >&g...

...>> On 18/02/2018 9:06 PM, Michael Hannon wrote: > >>>> > >>>> Greetings. The group that I work with has just started using the > approach > >>>> outlined in Karl Broman's handy primer: > >>>> > >>>> http://kbroman.org/pkg_primer/pages/vignettes.html < > http://kbroman.org/pkg_primer/pages/vignettes.html> > >>>> > >>>> to create vignettes for a couple of R packages. > >>>> > >>>> This works fine as long as we have a current Rmd version of th...

As the title suggests, when building R packages on Windows, what is the difference between: R CMD build --binary mypack And R CMD INSTALL --build mypack ?? The former is suggested by my previous notes and seems to work, and the latter is suggested by http://www.biostat.jhsph.edu/~kbroman/Rintro/Rwinpack.html, and also seems to work. Thanks in advance Mick

...> <murdoch.duncan at gmail.com> wrote: >> On 18/02/2018 9:06 PM, Michael Hannon wrote: >>> >>> Greetings. The group that I work with has just started using the approach >>> outlined in Karl Broman's handy primer: >>> >>> http://kbroman.org/pkg_primer/pages/vignettes.html >>> >>> to create vignettes for a couple of R packages. >>> >>> This works fine as long as we have a current Rmd version of the vignette. >>> But >>> we have some old PDF documents that we'd like to includ...

On 18/02/2018 9:06 PM, Michael Hannon wrote: > Greetings. The group that I work with has just started using the approach > outlined in Karl Broman's handy primer: > > http://kbroman.org/pkg_primer/pages/vignettes.html > > to create vignettes for a couple of R packages. > > This works fine as long as we have a current Rmd version of the vignette. But > we have some old PDF documents that we'd like to include as vignettes as well. > I'd like to know...

...uctions provided there do you find lacking? Best, Ista On Sun, Feb 18, 2018 at 9:06 PM, Michael Hannon <jmhannon.ucdavis at gmail.com> wrote: > Greetings. The group that I work with has just started using the approach > outlined in Karl Broman's handy primer: > > http://kbroman.org/pkg_primer/pages/vignettes.html > > to create vignettes for a couple of R packages. > > This works fine as long as we have a current Rmd version of the vignette. But > we have some old PDF documents that we'd like to include as vignettes as well. > I'd like to know if...

>Buenas, Estoy empezando a utilizar latex y hay un par de cosas que no se muy bien como hacer ni como buscar en google. Tengo un data.frame llamado datos con 3 variables, A,B y C Si pongo <<>> datos$A @ me devuelve error sin embargo si lo hago con <<>>= datos[,1] @ me da correctamente. No puedo con Sneave al interior de un data frame usando el nombre de las

Hi all, I am trying to re-compile some "unmaintained" (it seems) packages, namely rSoNIA and dynamicnetwork from: http://csde.washington.edu/~skyebend/rsonia/rsoniaDemo/ These packages predates R 2.10.0 so they need to be recompile. After split the single big file in /man in each packages into a file for each function + some minor fix, I successfully manage to recompile and load

Hi all, I'm using windowsXP and R 2.10.0. I downloaded "randomForest 4.5-33.tar.gz" from its archive, but how do I make it into a installation ZIP file? Thanks, Ted

On Mon, 8 Nov 2004 ssim at lic.co.nz wrote: > > Is there an add-on package in R for QTL interval mapping for outbred > population, eg. Haley-Knott regression method ? > > Stella I believe Karl Broman's R/QTL (http://biosun01.biostat.jhsph.edu/~kbroman/software/) and Brian Yandell's bim (http://www.stat.wisc.edu/~yandell/qtl/software/), Richard Mott's happyR (http://www.well.ox.ac.uk/happy/happyR.shtml) are mainly for experimental crosses, but do multipoint analyses. You might also try QTL Express (http://qtl.cap.ed.ac.uk/), or if you ar...

I found the following document on making R packages. But it is old. I'm wondering if there is more current ones and hopefully more complete ones. http://biosun1.harvard.edu/courses/individual/bio271/lectures/L6/Rpkg.pdf

Full_Name: Karl W Broman Version: 1.7.1 OS: Linux Submission from: (NULL) (162.129.44.18) There appears to be a slight problem with round(); for rounding off a 5, it should go to the even digit, but there appear to be some cases where it goes to an odd digit; see below. Thanks! karl ~[1007]$ R --vanilla R : Copyright 2003, The R Development Core Team Version 1.7.1 (2003-06-16) R is free

Hi R Gurus! I have 2 questions, please: a. I'm putting together a little baby package on SUSE Linux 10.1. I want to create a zip of the package for windows. How should I create that please? b. I don't know if the following is possible but here it is: I have R and a bunch of libraries set up very nicely. I would like to hand off this setup to someone else. Should I just copy

Hi all, Unfortunately I must use winXP at my job, so I'm trying install from source RMySQL. Here are some details about this problem: - R 1.7.1 - RMySQL 0.5-2 - mysql 4.1.0-alpha-max-nt I followed the instructions posted in http://www.biostat.jhsph.edu/~kbroman/Rintro/Rwinpack.html and the following messages appeared. BTW, thanks in advance for your help and comments. C:\Program Files\R\rw1071\src\gnuwin32>make pkg-RMySQL ---------- Making package RMySQL ------------ ********************************************** WARNING: this package has a...

Quisiera saber si alguien me puede ayudar con documentación o el lugar donde encontrarla, relacionada con la elaboración de paquetes en R, tengo algunos script programados y quiero convertirlos en paquetes; he leído el manual para hacer extensiones pero quiero algo más sintético y practico,  Agradezco cualquier colaboración al respecto Heber [[alternative HTML version deleted]]

...hat I read next? One other thing...the "R.h" include file doesn't seem to include the "R_ext/PrtUtil.h", where Rprintf is defined. If I wish to use Rprintf, should I include the latter file; should it have been included in R.h? Thanks! karl ----------------- Karl W Broman kbroman at jhsph.edu ----------------- -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the "body", not the subject...

Hello. I have what I know to be a simple question, but never having done anything like this it is pretty tough. I'm trying to write an R package. I have a collection of functions that I loaded into R and then used package.skeleton(). After editing everything in the resulting folder, call it NewPackage, I tried to follow along with some instructions I found for Windows users. I installed