search for: jmburgo

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2010 May 20
1
Strange behaviour when using diff with POSIXt and POSIXlt objects
...arched the documentation) and I cannot figure why this happens. Any ideas? All the best, Julian Julian Mariano Burgos Hafrannsóknastofnunin/Marine Research Institute Skúlagata 4, 121 Reykjavík, Iceland Sími/Telephone : +354-5752037 Bréfsími/Telefax: +354-5752001 Netfang/Email: julian@hafro.is, jmburgos@uw.edu [[alternative HTML version deleted]]
2007 Jul 20
3
SOS
Dear all, I am a new user of R. I would like to know how to get fund's returns in percentage (%). For example, I use: R <- ts(read.xls("FundData"), frequency = 12, start = c(1996, 1)) Whith this program, the returns are like 0.0152699. But, I would like to have 1.52%. Please advise me about the function. Thanks! Fabrice
2009 Sep 14
1
ggplot2 legend text....a basic question
...of "n"). b) How to avoid having a legend for the polygon? Many thanks, Julian -- Julian Mariano Burgos Hafranns?knastofnunin/Marine Research Institute Sk?lagata 4, 121 Reykjav?k, Iceland S?mi/Telephone : +354-5752037 Br?fs?mi/Telefax: +354-5752001 Netfang/Email: julian at hafro.is, jmburgos at u.washington.edu
2010 Feb 15
1
GAM for non-integer proportions
...Or I am missing something obvious? I will be thankful for any input. All the best, Julian -- Julian Mariano Burgos Hafrannsóknastofnunin/Marine Research Institute Skúlagata 4, 121 Reykjavík, Iceland Sími/Telephone : +354-5752037 Bréfsími/Telefax: +354-5752001 Netfang/Email: julian@hafro.is, jmburgos@uw.edu [[alternative HTML version deleted]]
2011 Jan 26
0
post-hoc comparisons in GAMs (mgcv) with parametric terms
...egorical predictor in the models where it is significant. Any suggestions? Thanks, Julian -- Julian Mariano Burgos Hafranns?knastofnunin/Marine Research Institute Sk?lagata 4, 121 Reykjav?k, Iceland S?mi/Telephone : +354-5752037 Br?fs?mi/Telefax:? +354-5752001 Netfang/Email: julian at hafro.is, jmburgos at uw.edu
2011 Jun 11
0
problems with geom_vline, histograms, scale=free and facets in ggplot
...the extra facets when removing it. Is this a bug? Any help will be very welcomed. Julian -- Julian Mariano Burgos Hafranns?knastofnunin/Marine Research Institute Sk?lagata 4, 121 Reykjav?k, Iceland S?mi/Telephone : +354-5752037 Br?fs?mi/Telefax: +354-5752001 Netfang/Email: julian at hafro.is, jmburgos at uw.edu
2006 Oct 20
2
Recursive decreasing sequences
Hello fellow R's, I'm sure there must be an easy way to do this. But after digging in the documentation and thinking about it for a while I couldn't figure it out. I need to get a decreasing recursive vector in. I mean something like this: if starting at 2, and ending at 6, the vector should be 2 3 4 5 6 3 4 5 6 4 5 6 5 6 6 An easy way would be to do this x <-
2007 Oct 24
3
jEdit for R
Hi, I just installed jEdit but have no clue, whether I can run my code a'la "ctrl-R" directly from jEdit script, or should source it from R command line, after saving it first in jEdit. thanks for any help, rob -- View this message in context: http://www.nabble.com/jEdit-for-R-tf4684065.html#a13384782 Sent from the R help mailing list archive at Nabble.com.
2007 Nov 14
3
How to get row numbers of a subset of rows
Hello list, I read in a txt file using <B<-read.table(file="data.snp",header=TRUE,row.names=NULL) by specifying the row.names=NULL so that the rows are numbered. Below is an example after how the table looks like using <B[1:10,1:3] SNP Chromosome PhysicalPosition 1 SNP_A-1909444 1 7924293 2 SNP_A-2237149 1 8173763
2009 Sep 21
3
compute differences
Hi, I have a problem. I have a data frame looking like: ID val A? .3 B? 1.2 C? 3.4 D? 2.2 E? 2.0 I need to CREATE the following TABLE: CASE?? DIFF A-A??? 0 A-B??? -0.9 A-C??? -3.1 A-D??? -1.9 A-E??? -1.7 B-A??? ... B-B??? ... B-C B-D B-E C-A C-B C-C C-D C-E D-A D-B D-C D-D D-E E-A E-B E-C E-D E-E WHERE CASE IS THE COUPLE OF ELEMENTS CONSIDEREDM AND DIFF IS THE computed DIFFERENCE between
2008 May 13
9
A Very Simple Question
On 5/13/2008 10:27 AM, Yukihiro Ishii wrote: > Hi Rusers! > > I am ashed of asking such a simple question. > > X<-matrix(rnorm(24), 4) > X0<-apply(X,2,mean) > > What I want is a matrix which consists of colums such as X[,1]--X0[1]. > > X-X0 doesn't work. > > Perhaps apply function? scale(X, scale=FALSE) ?scale > Thanks in advance. > >
2010 Sep 16
4
help me understand how things work.
Hello I have some strange output from R and I try to understand how R works. Could you please help me with that? temp <- rbind (c(10,1),c(99,98)) > temp [,1] [,2] [1,] 10 1 [2,] 99 98 > dist(temp) 1 2 131.6435 > sqrt(dist(temp)) 1 2 11.47360 so far so good. until the nex line: when I try to do what i did before but adding the 1/(what I did
2007 Nov 23
0
R users in Cyprus
...Dept of Family/Preventive Medicine E mailto:cberry at tajo.ucsd.edu UC San Diego http://famprevmed.ucsd.edu/faculty/cberry/ La Jolla, San Diego 92093-0901 ------------------------------ Message: 55 Date: Wed, 21 Nov 2007 09:57:09 -0800 From: Julian Burgos <jmburgos at u.washington.edu> Subject: Re: [R] better curve To: mysimbaa <adel.tekari at sisltd.ch> Cc: r-help at r-project.org Message-ID: <47447175.8080301 at u.washington.edu> Content-Type: text/plain; charset=ISO-8859-1; format=flowed Hello Mysimbaa, If you want to fit a smooth line to...
2006 Jun 23
1
Running executable files from R
Hello fellow R's, I apologize if this question was answer elsewhere. I have an executable file that I need to run from R. Basically I want to use R to create the input files this executable requires, then run it, and finally use R again to analyze the output files. Because I have to do this many times I'd like to have the R code call the executable file after the input files are
2007 Aug 06
0
GAMs with errors in covariates
Dear list, I'm interested in fitting a generalized additive model in which some of the covariates are derived quantities and known measurement errors, and I am not sure how to incorporate the uncertainty of these covariates into the model fitting process. Could anyone point me towards relevant examples or documentation? Thanks in advance, Julian Julian M. Burgos Fisheries Acoustics
2007 Jun 21
1
mgcv: lowest estimated degrees of freedom
Dear list, I do apologize if these are basic questions. I am fitting some GAM models using the mgcv package and following the model selection criteria proposed by Wood and Augustin (2002, Ecol. Model. 157, p. 157-177). One criterion to decide if a term should be dropped from a model is if the estimated degrees of freedom (EDF) for the term are close to their lower limit. What would be the
2007 Aug 14
1
weights in GAMs (package mgcv)
Dear list, I?m using the ?mgcv? package to fit some GAMs. Some of my covariates are derived quantities and have an associated standard error, so I would like to incorporate this uncertainty into the GAM estimation process. Ideally, during the estimation process less importance would be given to observations whose covariates have high standard errors. The gam() function in the ?mgcv? package
2005 Nov 09
2
Variograms and large distances
Hello R list, I need to compute empirical variograms using data from a large geographic area (~10^6 km2). Although I could not find a specific reference, I assume that both geoR and gstat calculate distances among data points assuming points are on a flat surface (using the Pythagorean Theorem). Because the location of my data is large and located near the pole, assuming that latitude and
2007 Oct 08
2
variance explained by each term in a GAM
Hello fellow R's, I do apologize if this is a basic question. I'm doing some GAMs using the mgcv package, and I am wondering what is the most appropriate way to determine how much of the variability in the dependent variable is explained by each term in the model. The information provided by summary.gam() relates to the significance of each term (F, p-value) and to the