search for: jeffreyhorn

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2011 Apr 12
2
parse_Rd raises error when example section contains a quoted percent character
..._US.UTF-8 [7] LC_PAPER=en_US.UTF-8 LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] tools stats graphics grDevices datasets utils methods [8] base Jeff -- http://biostat.mc.vanderbilt.edu/JeffreyHorner
2015 Mar 06
1
R with Array Hashes
...entation passed 99% of the tests, however there were two that gave differing results which I think are related to traversing hashed environments. > > - what sort of speedups do you see on which type of benchmarks? I wrote up some notes on the benchmark I conducted here: https://github.com/jeffreyhorner/R-Array-Hash/tree/master/benchmarks > When you asked about benchmark code on Twitter, I shared the somewhat > well-known (but no R ...) http://benchmarksgame.alioth.debian.org/ > Did you write new benchmarks? Did you try the ones once assembled by Simon? I decided to design the benchm...
2006 Sep 29
1
Possible bug in Rcons_vprintf
...copy) @@ -638,7 +638,7 @@ res = R_BUFSIZE; } #endif /* HAVE_VA_COPY */ - R_WriteConsole(p, strlen(buf)); + R_WriteConsole(p, strlen(p)); #ifdef HAVE_VA_COPY if(usedRalloc) vmaxset(vmax); if(usedVasprintf) free(p); Jeff -- http://biostat.mc.vanderbilt.edu/JeffreyHorner
2007 Feb 21
1
Adding difftime objects to POSIXt objects
...u status Under development (unstable) major 2 minor 5.0 year 2007 month 01 day 07 svn rev 40398 language R version.string R version 2.5.0 Under development (unstable) (2007-01-07 r40398) Jeff -- http://biostat.mc.vanderbilt.edu/JeffreyHorner
2009 Nov 05
2
Active bindings in attached environments
Hi, I was wondering if this is expected behavior for active bindings in attached environments, or if this is a bug: > e <- new.env() > makeActiveBinding('x',function() 'foo',e) > ls(e) [1] "x" > attach(e) > search() [1] ".GlobalEnv" "e" "package:graphics" [4] "package:grDevices"
2010 Jul 02
2
Best way to determine if you're running 32 or 64 bit R on windows
...t? if (.Machine$sizeof.pointer==4){ cat('32\n') } else { cat('64\n') } Or is it better to test something in R.version, say os? I'd like to use this to specify appropriate linker arguments when building the RMySQL windows package. Jeff -- http://biostat.mc.vanderbilt.edu/JeffreyHorner
2006 Aug 31
1
Overriding InitTempDir
...ace R_SESSION_TMPDIR!"); exit(1); } } This function is called after Rf_initEmbeddedR; it's seems like a hack but it works. Does anyone have other solutions? Maybe InitTempDir could check if R_TempDir was not NULL and then just return. -- http://biostat.mc.vanderbilt.edu/JeffreyHorner
2008 Sep 04
1
Possible R graphics devices
...ct that aims to create interactive graphics within the HTML canvas tag using the Processing.js javascript library. It's quite eye-opening: http://ejohn.org/blog/processingjs I believe an R graphics device could target javascript as well! Thoughts? Jeff -- http://biostat.mc.vanderbilt.edu/JeffreyHorner
2007 Aug 22
1
Sweave(), pdf(), and fonts
...ed or a suitable replacement if it's not. You'll have to forgive my ignorance about font usage in R with UNIX/Linux; it's just so darn confusing, and I'm saying that will at least 10 years of UNIX/Linux experience under my belt. Thanks, Jeff -- http://biostat.mc.vanderbilt.edu/JeffreyHorner
2007 Mar 24
2
Subtle bug in do_basename
...) */ - while ( *(p = buf + strlen(buf) - 1) == fsp ) *p = '\0'; + if(strlen(p)) + while ( *(p = buf + strlen(buf) - 1) == fsp ) *p = '\0'; if ((p = Rf_strrchr(buf, fsp))) p++; else Best, Jeff -- http://biostat.mc.vanderbilt.edu/JeffreyHorner
2015 Mar 06
2
R with Array Hashes
Hi, I wanted to share with the mailing list members here details about the project I've been working on: https://github.com/jeffreyhorner/R-Array-Hash This is a re-implementation of R's hashed environments, the global variable cache, the global string cache and symbol table with cache-conscious array hash tables. The results are quite encouraging. However, the implementation is a big departure from R's API: "An array...
2006 Nov 03
1
R CMD BATCH: unable to start device PNG
...does depend on having GhostScript installed. (Device 'GDD' in 'GDD' is another alternative using several other additional pieces of software.) You can find GDD and another alternative Cairo here: http://www.rosuda.org/R Jeff -- http://biostat.mc.vanderbilt.edu/JeffreyHorner ______________________________________________ R-help at stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -------------------...
2007 Jul 07
1
R graphics device for flash apps
...bout a closed-source version? There are other closed-source packages available for R (the only one I know of is xlsReadWrite), so it seems to be a reasonable question. Comments, criticisms, flames... are all welcome. Email me off-list if you'd like. Jeff -- http://biostat.mc.vanderbilt.edu/JeffreyHorner
2008 Feb 13
0
RFC for package PopCon: a popularity contest for R and packages
...uested from his/her code. Once the cache is full, the goal is to flush the data to a central server for storage, free for anyone to download and analyze. That's it. Pretty simple use and works behind the scenes. You can get the prototype here: http://biostat.mc.vanderbilt.edu/twiki/pub/Main/JeffreyHorner/PopCon_0.1.tar.gz And note that flushing of the cache is NOT TURNED ON and IT WON'T FORWARD ANY DATA ANYWHERE! It only gets deleted. So, I envision all the software and data generated and stored to be licensed under a GPL and a Creative Commons license, or even public domain. Thoughts? I...
2008 Feb 14
0
RFC for package PopCon: a popularity contest for R and packages
...uested from his/her code. Once the cache is full, the goal is to flush the data to a central server for storage, free for anyone to download and analyze. That's it. Pretty simple use and works behind the scenes. You can get the prototype here: http://biostat.mc.vanderbilt.edu/twiki/pub/Main/JeffreyHorner/PopCon_0.1.tar.gz And note that flushing of the cache is NOT TURNED ON and IT WON'T FORWARD ANY DATA ANYWHERE! It only gets deleted. So, I envision all the software and data generated and stored to be licensed under a GPL and a Creative Commons license, or even public domain. Thoughts? I...
2006 Oct 09
1
Discussion starter for package level Connection API
...); return con->write(buf, size, n, con); } Thus, the user has no access to the Rconnection at all. Only question from me is whether there's too much overhead in calling getConnection(), especially when calling R_FgetcConnection() in a loop. Jeff -- http://biostat.mc.vanderbilt.edu/JeffreyHorner
2012 Nov 21
1
paths and Rook problems only in OSX CRAN binary package?
...oot" is defined as: Browse[1]> root [1] "/Volumes/XT3/Rdev-web/QA/Simon/packages/leopard-universal/Rlib/2.15/BayesFactor/." But "find" returns nothing for "root": Browse[1]> find("root") character(0) In the Rook source here (https://github.com/jeffreyhorner/Rook/blob/master/Rook/R/File.R) is the reference to "root", but I'm not sure where the specific path value comes from. Further information: > sessionInfo() R version 2.15.2 (2012-10-26) Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit) locale: [1] en_AU.UTF-8/en_AU.UTF-8/en...
2007 May 01
1
Embedding R and registering routines
...)' to load RApache.so, a package that implements the RApache API. This two-library system works, but the implementation is too complex. I'd like to simplify down to just one shared library. Any comments, suggestion are much appreciated. Thanks, Jeff -- http://biostat.mc.vanderbilt.edu/JeffreyHorner
2009 Mar 31
3
RMySQL compile
I am trying to install RMySQL on OpenSolaris and need to pass some options to configure. Tried the 3 recommended ways of doing it and nothing works, configure cannot find the headers and the libs. I ran configure manually and that worked fine ./configure CC=cc CFLAGS="-dalign -KPIC -xlic_lib=sunperf" LDFLAGS="-L/usr/sfw/lib
2008 Jul 24
3
Should this PDF render correctly without font embedding?
...39;, pos=2) text(0.5,0.7, 'Yo Yo Yo', pos=2) text(0.5,0.6, 'Yo Yo Yo Yo', pos=2) text(0.5,0.5, 'Yo Yo Yo Yo Yo', pos=2) text(0.5,0.4, 'Yo Yo Yo Yo Yo Yo', pos=2) text(0.5,0.3, 'Yo Yo Yo Yo Yo Yo Yo', pos=2) dev.off() Jeff -- http://biostat.mc.vanderbilt.edu/JeffreyHorner