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I deleted my library, reinstalled R, and had the same issue -- couldn't install anything into its newly created library. -----Original Message----- From: Jeff Newmiller [mailto:jdnewmil at dcn.davis.ca.us] Sent: Tuesday, March 27, 2018 2:26 PM To: Paul Lantos <paul.lantos at duke.edu> Cc: r-help at r-project.org Subject: RE: [R] unable to move temporary installation of package Do you have other instances of R open at the time you are doing this? Did you already have mgcv i...

Are they the same with .RData being the newer format?? Thanks, ...Tao

Hi, I'm trying to user lmer function from lmerTest package because, if I understood correectly, it allows to make better inference than lmer method from lme4 package. However, whatever I do I keep getting this error: Error in lme4::lFormula(formula = mark ~ ssCount + sTime+ : rank of X = 1660 < ncol(X) = 1895 any ideas what could be a problem? thanks, Srecko [[alternative HTML

I don't believe I've gotten a reply from a Kevin Thorpe. -------- Original message -------- From: Jeff Newmiller <jdnewmil at dcn.davis.ca.us> Date: 3/27/18 5:57 PM (GMT-05:00) To: Paul Lantos <paul.lantos at duke.edu> Cc: r-help at r-project.org Subject: RE: [R] unable to move temporary installation of package Have you investigated the issue Kevin Thorpe suggested? -- Sent from my phone. Please excuse my bre...

...u suggest deleting my personal directory and recreating it? I > get the same error if I try and install packages to my documents, my > desktop, wherever, so I sort of doubt that would fix the problem. > > Paul > > > -----Original Message----- > From: Jeff Newmiller [mailto:jdnewmil at dcn.davis.ca.us] > Sent: Tuesday, March 27, 2018 1:14 PM > To: Paul Lantos <paul.lantos at duke.edu> > Cc: r-help at r-project.org > Subject: RE: [R] unable to move temporary installation of package > > Nothing jumps out at me yet. > > 1) You missed including the te...

...my brevity. On March 27, 2018 2:31:31 PM PDT, Paul Lantos <paul.lantos at duke.edu> wrote: >I deleted my library, reinstalled R, and had the same issue -- couldn't >install anything into its newly created library. > >-----Original Message----- >From: Jeff Newmiller [mailto:jdnewmil at dcn.davis.ca.us] >Sent: Tuesday, March 27, 2018 2:26 PM >To: Paul Lantos <paul.lantos at duke.edu> >Cc: r-help at r-project.org >Subject: RE: [R] unable to move temporary installation of package > >Do you have other instances of R open at the time you are doing this? &gt...

...and gotten the same error. Would you suggest deleting my personal directory and recreating it? I get the same error if I try and install packages to my documents, my desktop, wherever, so I sort of doubt that would fix the problem. Paul -----Original Message----- From: Jeff Newmiller [mailto:jdnewmil at dcn.davis.ca.us] Sent: Tuesday, March 27, 2018 1:14 PM To: Paul Lantos <paul.lantos at duke.edu> Cc: r-help at r-project.org Subject: RE: [R] unable to move temporary installation of package Nothing jumps out at me yet. 1) You missed including the text of your command (presumably instal...

...nk that would reproduce the problem? i think it needs to be the corrupted text file where R.utils::countLines( txtfile ) gives 809367. i am able to reproduce on two distinct windows machines but no guarantee i'm not doing something dumb On Sat, Jul 15, 2017 at 6:29 PM, Jeff Newmiller <jdnewmil at dcn.davis.ca.us> wrote: > I am not able to reproduce your segfault on a Windows 7 platform either: > > ########################## > fn1 <- "d:/DADOS_ENEM_2009.txt" > sessionInfo() > ## R version 3.4.1 (2017-06-30) > ## Platform: x86_64-w64-mingw32/x64 (64-bi...

...s ENEM 2009/Dados Enem 2009/DADOS_ENEM_2009.txt "30beb57419486108e98d42ec7a2f8b19" > tools::md5sum( "S:/temp/crash.txt" ) S:/temp/crash.txt "30beb57419486108e98d42ec7a2f8b19" On Sun, Jul 16, 2017 at 10:10 AM, Jeff Newmiller <jdnewmil at dcn.davis.ca.us> wrote: > So you are saying there are two problems... one that produces a corrupt > file from a valid compressed file, and one that segfaults when presented > with that corrupt file? Can you please confirm the file name and run md5sum > on it and share the result...

...ou don't lose the large downloaded file after the crash tf <- tempfile() download.file( "https://sisyphus.project.cwi.nl/r-bug-17311-crash.txt" , tf , mode = 'wb' ) sessionInfo() x <- readLines( tf ) On Sun, Jul 16, 2017 at 2:22 PM, Jeff Newmiller <jdnewmil at dcn.davis.ca.us> wrote: > I am stuck. The archive package won't compile for me on Ubuntu, and the > CRANextra repo seems to be down so I cannot install packages on Windows > right now. Perhaps you can zip the corrupt text file and put it online > somewhere? Don't use the...

...> "30beb57419486108e98d42ec7a2f8b19" > > > > tools::md5sum( "S:/temp/crash.txt" ) > S:/temp/crash.txt > "30beb57419486108e98d42ec7a2f8b19" > > > > >On Sun, Jul 16, 2017 at 10:10 AM, Jeff Newmiller ><jdnewmil at dcn.davis.ca.us> >wrote: > >> So you are saying there are two problems... one that produces a >corrupt >> file from a valid compressed file, and one that segfaults when >presented >> with that corrupt file? Can you please confirm the file name and run >md5sum...

Thanks, Kevin. I have done that but no luck. Paul -----Original Message----- From: Kevin E. Thorpe [mailto:kevin.thorpe at utoronto.ca] Sent: Tuesday, March 27, 2018 2:15 PM To: Paul Lantos <paul.lantos at duke.edu>; Jeff Newmiller <jdnewmil at dcn.davis.ca.us> Cc: r-help at r-project.org Subject: Re: [R] unable to move temporary installation of package I have seen that error from students trying to install, usually from the Rcpp package. One suggestion I received was to try disabling your virus scanner while doing the install. Th...

...ot;TATAMOTORS" "X4" THe above has to be the first row of IDT[[4]]. The first row is getting parsed as the column name. How do you make that the first row of IDT[[4]]? Thanking you, Yours sincerely, AKSHAY M KULKARNI ________________________________ From: Jeff Newmiller <jdnewmil at dcn.davis.ca.us> Sent: Monday, April 10, 2023 12:27 AM To: akshay kulkarni <akshay_e4 at hotmail.com>; r-help at r-project.org <r-help at r-project.org> Subject: Re: [R] extracting pdf tables... Your code used cbind. My first answer was appropriate for rbind. So you still need t...

...lem? i think it >needs to be the corrupted text file where R.utils::countLines( >txtfile >) gives 809367. i am able to reproduce on two distinct windows >machines >but no guarantee i'm not doing something dumb > >On Sat, Jul 15, 2017 at 6:29 PM, Jeff Newmiller ><jdnewmil at dcn.davis.ca.us> >wrote: > >> I am not able to reproduce your segfault on a Windows 7 platform >either: >> >> ########################## >> fn1 <- "d:/DADOS_ENEM_2009.txt" >> sessionInfo() >> ## R version 3.4.1 (2017-06-30) >> ##...

I am not able to reproduce this on a Linux platform: #######################3 fn1 <- "/home/jdnewmil/Downloads/Microdados ENEM 2009/Dados Enem 2009/DADOS_ENEM_2009.txt" sessionInfo() ## R version 3.4.1 (2017-06-30) ## Platform: x86_64-pc-linux-gnu (64-bit) ## Running under: Ubuntu 14.04.5 LTS ## ## Matrix products: default ## BLAS: /usr/lib/libblas/libblas.so.3.0 ## LAPACK: /usr/lib/lapack/li...

...y have been the culprit. I disabled it and it's working now (even with my regular antivirus running). Thanks all for the advice! Paul -----Original Message----- From: Paul Lantos Sent: Tuesday, March 27, 2018 8:35 PM To: Kevin E. Thorpe <kevin.thorpe at utoronto.ca>; Jeff Newmiller <jdnewmil at dcn.davis.ca.us> Cc: r-help at r-project.org Subject: RE: [R] unable to move temporary installation of package Thanks, Kevin. I have done that but no luck. Paul -----Original Message----- From: Kevin E. Thorpe [mailto:kevin.thorpe at utoronto.ca] Sent: Tuesday, March 27, 2018 2:15 PM To: Pa...

...d:/DADOS_ENEM_2009.txt ## "83e61c96092285b60d7bf6b0dbc7072e" dat <- readLines( fn1 ) length( dat ) ## [1] 4148721 On Sat, 15 Jul 2017, Jeff Newmiller wrote: > I am not able to reproduce this on a Linux platform: > > #######################3 > fn1 <- "/home/jdnewmil/Downloads/Microdados ENEM 2009/Dados Enem > 2009/DADOS_ENEM_2009.txt" > sessionInfo() > ## R version 3.4.1 (2017-06-30) > ## Platform: x86_64-pc-linux-gnu (64-bit) > ## Running under: Ubuntu 14.04.5 LTS > ## > ## Matrix products: default > ## BLAS: /usr/lib/libblas/lib...

...computations on a 10-core processor @3.1GHz with 20 threads (using only one thread) and running the Fedora 27 with 4.15.9 kernel. I have to say that I was surprised to see the difference at n = 10 itself. Thanks again! Best wishes, Ranjan On Thu, 29 Mar 2018 23:26:12 -0700 Jeff Newmiller <jdnewmil at dcn.davis.ca.us> wrote: > I don't know if this is more efficient than enumerating with distinct > directions and weeding... it seems kind of heavyweight to me: > > ####### > library(gtools) > directionless_circular_permutations <- function( n ) { > v <- se...

...00007ffe38d7c5b4 in ntdll!RtlUserThreadStart () from /cygdrive/c/WINDOWS/SYSTEM32/ntdll.dll #17 0x0000000000000000 in ?? () Backtrace stopped: previous frame inner to this frame (corrupt stack?) (gdb) Bill Dunlap TIBCO Software wdunlap tibco.com On Sat, Jul 15, 2017 at 3:29 PM, Jeff Newmiller <jdnewmil at dcn.davis.ca.us> wrote: > I am not able to reproduce your segfault on a Windows 7 platform either: > > ########################## > fn1 <- "d:/DADOS_ENEM_2009.txt" > sessionInfo() > ## R version 3.4.1 (2017-06-30) > ## Platform: x86_64-w64-mingw32/x64 (64-bi...

Hello r-help, I've been banging my head against the computer in an attempt to learn how to divide my matrix into segments by rows. I want to be able to return each segment as a newly named object. I've tried looking at the apply functions and creating a for loop but brain no work. Here's the basic starting objects that I believe would be needed to separate the matrix. mat <-