search for: javah

Starting OpenJDK 10, the 'javah' utility is no more provided [1], and its functionality is provided by 'javac' itself. Hence, do not error out on missing 'javah', and store whether it was found; in case it is not, then: 1) assume 'javac' has the -h parameter to generate the C header, and make use o...

.... When I try “R CMD INSTALL c:\SJava_0.78-0.tar.gz” I get the following (and haven’t a clue what it could mean): ---------Making package SJava-------------- Building JNI header files... Extracting the classes from Environment.jar /jdk1.3/bin/jar: not found RForeignReference /jdk1.3/bin/javah: not found ROmegahat Interpreter /jdkl.3/bin/javah: not found REvaluator /jdkl.3/bin/Javah: not found RManualFunctionActionListener /jdk1.3/bin/javah: not found /jdkl.3/bin/javah: not found adding build stamp to DESCRIPTION running src/Makefile.win (cd .. ; ./configure.win c:...

...- root/admin for /usr/local/Cellar/r/3.4.4/lib/R/etc/Makeconf? (y/n [n]) y override rw-r--r-- root/admin for /usr/local/Cellar/r/3.4.4/lib/R/etc/ldpaths? (y/n [n]) y So I really don?t know if this is the problem here or not. I really think the problem for R is and rJava is there is no longer a javah file. Unable to locate an executable at "/Library/Java/JavaVirtualMachines/jdk-10.jdk/Contents/Home/bin/javah" (-1) Anyhow? I?m still puzzle by the fact that R CMD javareconf with sudo and without has different outcome. > configuring Java is not on-topic here I can't understa...

.../Java/JavaVirtualMachines/jdk-10.jdk/Contents/Home/bin/java >Java version : 10 >Java home path : >/Library/Java/JavaVirtualMachines/jdk-10.jdk/Contents/Home >Java compiler : >/Library/Java/JavaVirtualMachines/jdk-10.jdk/Contents/Home/bin/javac >Java headers gen.: /usr/bin/javah >Java archive tool: >/Library/Java/JavaVirtualMachines/jdk-10.jdk/Contents/Home/bin/jar >Non-system Java on macOS > >trying to compile and link a JNI program >detected JNI cpp flags : -I$(JAVA_HOME)/include >-I$(JAVA_HOME)/include/darwin >detected JNI linker flags : -L$(J...

...a interpreter : /Library/Java/JavaVirtualMachines/jdk-10.jdk/Contents/Home/bin/java Java version : 10 Java home path : /Library/Java/JavaVirtualMachines/jdk-10.jdk/Contents/Home Java compiler : /Library/Java/JavaVirtualMachines/jdk-10.jdk/Contents/Home/bin/javac Java headers gen.: /usr/bin/javah Java archive tool: /Library/Java/JavaVirtualMachines/jdk-10.jdk/Contents/Home/bin/jar Non-system Java on macOS trying to compile and link a JNI program detected JNI cpp flags : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/darwin detected JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm /usr/...

.../Makeconf? (y/n [n]) y >> override rw-r--r-- root/admin for >> /usr/local/Cellar/r/3.4.4/lib/R/etc/ldpaths? (y/n [n]) y >> >> So I really don?t know if this is the problem here or not. >> >> I really think the problem for R is and rJava is there is no longer a javah file. >> >> Unable to locate an executable at >> "/Library/Java/JavaVirtualMachines/jdk-10.jdk/Contents/Home/bin/javah" >> (-1) >> >> Anyhow? I?m still puzzle by the fact that R CMD javareconf with sudo and without has different outcome. > > Wh...

I failed to build SJava dure to teh error below. Any ideas? # R CMD INSTALL -c SJava_0.68-0.tar.gz * Installing *source* package 'SJava' ... checking for java... /opt/j2sdk1.4.2_06//bin/java Java VM /opt/j2sdk1.4.2_06//bin/java checking for javah... /opt/j2sdk1.4.2_06//bin/javah Looking in /opt/j2sdk1.4.2_06/include Looking in /opt/j2sdk1.4.2_06/include/linux checking for g++... no checking for c++... no checking for gpp... gpp checking for C++ compiler default output... b.out checking whether the C++ compiler works... configure: error: can...

.... yes checking for gcc option to accept ANSI C... none needed checking how to run the C preprocessor... gcc -E checking for egrep... grep -E checking for ANSI C header files... yes checking for java... /usr/java/jdk1.5.0_11/bin/java checking for javac... /usr/java/jdk1.5.0_11/bin/javac checking for javah... /usr/java/jdk1.5.0_11/bin/javah checking for jar... /usr/java/jdk1.5.0_11/bin/jar checking whether Java interpreter works... yes checking for Java environment... in /usr/java/jdk1.5.0_11 checking for /usr/java/jdk1.5.0_11/include/jni.h... yes checking for /usr/java/jdk1.5.0_11/include/./jni_md.h...

R CMD config exports the following variables: JAR Java archive tool command JAVA Java interpreter command JAVAC Java compiler command JAVAH Java header and stub generator command JAVA_HOME path to the home of Java distribution JAVA_LIBS flags needed for linking against Java libraries JAVA_CPPFLAGS C preprocessor flags needed for compiling JNI programs JAVA_LD_LIBRARY_PATH is defined in Makeconf, but not export...

...nu99 supports static inline... yes checking Java support in R... present: interpreter : '/usr/bin/java' archiver : '/usr/bin/jar' compiler : '/usr/lib/jvm/java-1.5.0-gcj-4.3-1.5.0.0/jre/../bin/javac' header prep.: '/usr/lib/jvm/java-1.5.0-gcj-4.3-1.5.0.0/jre/../bin/javah' cpp flags : '' java libs : '-L/usr/lib/../lib/gcj-4.3-90 -L/usr/lib/jni -ljvm' configure: error: One or more Java configuration variables are not set. Make sure R is configured with full Java support (including JDK). Run R CMD javareconf as root to add Java support to R. I...

...tjmp is declared... yes checking whether siglongjmp is declared... yes checking Java support in R... present: interpreter : '/usr/bin/java' archiver : '/usr/bin/jar' compiler : '/home/astaines/.gentoo/java-config-2/current-user-vm/bin/javac' header prep.: '/usr/bin/javah' cpp flags : '-I/opt/sun-jdk-1.6.0.20/jre/../include -I/opt/sun-jdk-1.6.0.20/jre/../include/linux' java libs : '-L/opt/sun-jdk-1.6.0.20/jre/lib/amd64/server -L/opt/sun-jdk-1.6.0.20/jre/lib/amd64 -L/opt/sun-jdk-1.6.0.20/jre/../lib/amd64 -L -L/usr/java/packages/lib/amd64 -L/usr/li...

...packages: [1] stats graphics grDevices utils datasets methods base > root at SeansPC:~# R CMD javareconf Java interpreter : /usr/bin/java Java version : 1.6.0_15 Java home path : /usr/lib/jvm/java-6-sun-1.6.0.15/jre Java compiler : /usr/bin/javac Java headers gen.: /usr/bin/javah Java archive tool: /usr/bin/jar Java library path: $(JAVA_HOME)/lib/amd64/server:$(JAVA_HOME)/lib/amd64:$(JAVA_HOME)/../lib/amd64::/usr/java/packages/lib/amd64:/lib:/usr/lib JNI linker flags : -L$(JAVA_HOME)/lib/amd64/server -L$(JAVA_HOME)/lib/amd64 -L$(JAVA_HOME)/../lib/amd64 -L -L/usr/java/packag...

...T 'SJava_0.69-0.tar.gz' __ignored__ I then tried % R CMD INSTALL SJava_0.69-0.tar.gz * Installing to library '/Library/Frameworks/R.framework/Resources/ library' * Installing *source* package 'SJava' ... checking for java... /usr/bin/java Java VM /usr/bin/java checking for javah... no Sorry. We can currently only configure this package for IBM, Blackdown or Sun's Java implementation ERROR: configuration failed for package 'SJava' ** Removing '/Library/Frameworks/R.framework/Resources/library/SJava' Can someone tell me what I'm doing wrong? Since...

...and sys/time.h may both be included... yes configure: checking whether gcc -std=3Dgnu99 supports static inline... yes checking Java support in R... present: interpreter : '/usr/bin/java' archiver : '/usr/bin/jar' compiler : '/usr/bin/javac' header prep.: '/usr/bin/javah' cpp flags : '' java libs : '-L/usr/lib/jvm/java-6-openjdk/jre/lib/i386/server -L/usr/lib/jvm/java-6-openjdk/jre/lib/i386 -L/usr/lib/jvm/java-6-openjdk/jre/../lib/i386 -L -L/usr/java/packages/lib/i386 -L/lib -L/usr/lib -ljvm' configure: error: One or more Java configuration...

...ntu Linux R version is 2.13.1 Java installation is sun-java6 Next up is the result of javareconf: R CMD javareconf Java interpreter : /usr/bin/java Java version : 1.5.0 Java home path : /usr/lib/jvm/java-1.5.0-gcj-4.2-1.5.0.0/jre Java compiler : /usr/bin/javac Java headers gen.: /usr/bin/javah Java archive tool: /usr/bin/jar Java library path: /usr/lib/../lib/gcj-4.2-81:/usr/lib/jni JNI linker flags : -L/usr/lib/../lib/gcj-4.2-81 -L/usr/lib/jni -ljvm JNI cpp flags : Updating Java configuration in /etc/R Done. What little I've been able to find on this problem suggests that the...

...td=gnu99 supports static inline... yes checking Java support in R... present: interpreter : '/usr/lib/jvm/java-6-sun/jre/bin/java' archiver : '/usr/lib/jvm/java-6-sun/bin/jar' compiler : '/usr/lib/jvm/java-6-sun/bin/javac' header prep.: '/usr/lib/jvm/java-6-sun/bin/javah' cpp flags : '-I/usr/lib/jvm/java-6-sun/include -I/usr/lib/jvm/java-6-sun/include/linux' java libs : '-L/usr/lib/jvm/java-6-sun-1.6.0.07/jre/lib/amd64/server -L/usr/lib/jvm/java-6-sun-1.6.0.07/jre/lib/amd64 -L/usr/lib/jvm/java-6-sun-1.6.0.07/jre/../lib/amd64 -L -L/usr/java/packa...

...g whether siglongjmp is declared... yes* *checking Java support in R... present:* *interpreter : '/usr/lib/jvm/java-12-oracle/bin/java'* *archiver : '/usr/lib/jvm/java-12-oracle/bin/jar'* *compiler : '/usr/lib/jvm/java-12-oracle/bin/javac'* *header prep.: '/usr/bin/javah'* *cpp flags : '-I/usr/lib/jvm/java-12-oracle/include -I/usr/lib/jvm/java-12-oracle/include/linux'* *java libs : '-L/usr/lib/jvm/java-12-oracle/lib/server -ljvm -ldl'* *checking whether Java run-time works... ./configure: line 3766: /usr/lib/jvm/java-12-oracle/bin/java: No s...

...tu Linux R version is 2.13.1 Java installation is sun-java6 Next up is the result of javareconf: R CMD javareconf Java interpreter : /usr/bin/java Java version : 1.5.0 Java home path : /usr/lib/jvm/java-1.5.0-gcj-4.2-1.5.0.0/jre Java compiler : /usr/bin/javac Java headers gen.: /usr/bin/javah Java archive tool: /usr/bin/jar Java library path: /usr/lib/../lib/gcj-4.2-81:/usr/lib/jni JNI linker flags : -L/usr/lib/../lib/gcj-4.2-81 -L/usr/lib/jni -ljvm JNI cpp flags : Updating Java configuration in /etc/R Done. What little I've been able to find on this problem suggests that the...

Given: $JAVA_HOME=~/jdk1.7.0_40 $R_SHELL=/bin/sh $PATH=$R_HOME/bin:$JAVA_HOME/bin:... which jar --> ~/jdk1.7.0_40/bin/jar which javac --> ~/jdk1.7.0_40/bin/javac which javah --> ~/jdk1.7.0_40/bin/javah which java --> '', even though there is one in $JAVA_HOME/bin whereis java --> java: /bin/java /usr/bin/java /sbin/java /usr/sbin/java /lib/java /usr/lib/java /usr/local/bin/java /usr/share/java obviously missing the 1.7.0_40 version in $JAVA_HOME/bin...

This commit starts to split our massive, monolithic configure.ac file into smaller files, using the m4_include mechanism to combine them. I don't know if we should really do this, so I'm open to comments about it. However: - Our configure.ac script is 1800+ lines long, and that's pretty long. - configure.ac lacks structure; splitting it up might improve that. - From what I read,