search for: isa2

...user to install XP support "files for complex script and right-to-left languages" via the control panel for proper display of hebrew. How can such support be installed?? The hebrew fonts have been successfully installed and are functioning correctly. Right-to-left is not working in the ISA2 app. Tkx.

...ecking for file ‘BcDiag/DESCRIPTION’ ... OK* this is package ‘BcDiag’ version ‘1.0’* checking CRAN incoming feasibility ... NOTEMaintainer: ‘Aregay Mengsteab ’New submission* checking package namespace information ... OK* checking package dependencies ... ERRORPackages required but not available: ‘isa2’ ‘fabia’Packages suggested but not available for checking: ‘isa2’ ‘fabia’ Regards, Michael [[alternative HTML version deleted]]

...;, 'gdata', 'geoR', 'GGally', 'ggm',   'ggplot2', 'gmodels', 'gridBase', 'gWidgets', 'gWidgetstcltk', 'HH', 'Hmisc', 'httr', 'igraph',   'igraph0', 'inline', 'ipred', 'isa2', 'JavaGD', 'JGR', 'kernlab', 'KernSmoot [... truncated] > library(KEGGSOAP) Loading required package: BiocGenerics Attaching package: ‘BiocGenerics’ The following object(s) are masked from ‘package:stats’:     xtabs The following object(s) are masked from ‘...

I only recently discovered options("available_packages_filters" = list(add = TRUE, "license/FOSS")) [cf. help("available.packages", package="utils") in R 2.10.0 or later] which goes nicely with my options("checkPackageLicense" = TRUE) [new in R 2.11]. But now I want to purge my library of packages I would not have installed had I known about

...estriction that is incompatible with the GPL), but states an explicit dependency on the MASS package (which is not a "base" package and released under the GPL). Furthermore, several packages also prohibit commercial use, but list an explicit dependency on the methods package (e.g. gpclib, isa2, optmatch). As all of these packages are on CRAN, and at least one author is also a core R contributor (Duncan Murdoch for gpclib), I assume that the CRAN maintainers and/or the R Foundation do not consider these packages to violate the GPL, and therefore also do not agree with the FSF interpretat...

I'm in the process of converting some S3 methods to S4 methods. I have this function : setGeneric("enrichmentCalc", function(rs, organism, seqLen, ...){standardGeneric("enrichmentCalc")}) setMethod("enrichmentCalc", c("GenomeDataList", "BSgenome"), function(rs, organism, seqLen, ...) { ... ... ... })

CRAN (and crantastic) updates this week New packages ------------ * bdoc (1.0) Michael Anderson http://crantastic.org/packages/bdoc This package contains a function that will classify DNA barcodes as well as a few test and reference data sets. * bdsmatrix (1.0) Terry Therneau http://crantastic.org/packages/bdsmatrix This is a special case of sparse matrices, used by coxme and

...e?, ?systemfit?, ?anchors?, ?survey?, ?mlmRev?, ?MEMSS?, ?numDeriv?, ?ergm?, ?latentnet?, ?degreenet?, ?abind?, ?shapes?, ?multcomp?, ?fCalendar?, ?fSeries?, ?fts?, ?its?, ?tis?, ?tseries?, ?xts?, ?lmtest?, ?AER?, ?dynlm?, ?proto?, ?digest?, ?gpclib?, ?randomSurvivalForest?, ?vcd?, ?flexclust?, ?isa2?, ?leaps?, ?proxy?, ?gclus?, ?mvtnorm?, ?mlbench?, ?SparseM?, ?xtable?, ?RUnit?, ?timeSeries?, ?akima?, ?mclust?, ?trimcluster?, ?prabclus?, ?caTools?, ?gWidgets?, ?chron?, ?acepack?, ?TeachingDemos?, ?Design?, ?subselect?, ?latticeExtra?, ?gWidgetstcltk?, ?hexbin?, ?deldir?, ?tripack?, ?DAAG?,...

...hergm (1.2-5), hglm (1.1.1), highlight (0.2-1), Hmisc (3.8-2), hopach (2.9.1), ibr (1.2.2), identity (0.2-1), ifultools (1.0-7), imprProbEst (1.0.1), impute (1.22.0), imputeMDR (1.1), inline (0.3.5), inlinedocs (1.1), intamapInteractive (1.0-9), intervals (0.13.2), introgress (1.2.3), ipw (1.0-5), isa2 (0.2.1), ismev (1.35), isopam (0.9-8), kernlab (0.9-10), kmi (0.3-3), kml (1.1.2), ks (1.6.13), kza (1.03.1), languageR (1.0), lasso2 (1.2-11), latentnet (2.3-0), lattice (0.18-8), latticedl (1.1), latticeExtra (0.6-11), latticist (0.9-43), lda (1.2.1), ldDesign (1.2-0), lemma (1.3-1), lgtdl (1.1.1...