Displaying 13 results from an estimated 13 matches for "intel64_lin".
2020 Jul 10
3
Compilation error for R 4.0.2
...E4.2 -O3 -qopenmp
-fp-model precise -fPIC -I${MKLROOT}/include -I${CURLDIR}/include
-I${PCRE2DIR}/include "
setenv CXXFLAGS " ${CFLAGS} "
setenv FFLAGS " ${CFLAGS} "
setenv FCFLAGS " ${CFLAGS} "
setenv LDFLAGS " -Wl,-rpath=${MKLROOT}/lib/intel64_lin
-L${MKLROOT}/lib/intel64_lin -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core
-Wl,-rpath=/uufs/
chpc.utah.edu/sys/installdir/intel/compilers_and_libraries_2019.5.281/linux/compiler/lib/intel64_lin
-L/uufs/
chpc.utah.edu/sys/installdir/intel/compilers_and_l...
2015 Sep 30
1
Build R with MKL and ICC
...---------------------
$ldd bin/exec/R
linux-vdso.so.1 (0x00007ffc1e853000)
libR.so => /usr/lib64/R/lib/libR.so (0x00007f747091f000)
libRblas.so => not found !! is not yet installed in the machine !!
libm.so.6 => /lib64/libm.so.6 (0x00007f7470616000)
libiomp5.so => /opt/intel/lib/intel64_lin/libiomp5.so (0x00007f74702d5000)
libgcc_s.so.1 => /lib64/libgcc_s.so.1 (0x00007f74700be000)
libpthread.so.0 => /lib64/libpthread.so.0 (0x00007f746fea1000)
libc.so.6 => /lib64/libc.so.6 (0x00007f746fae1000)
libdl.so.2 => /lib64/libdl.so.2 (0x00007f746f8dd000)
libblas.so.3 => not found...
2015 Sep 29
2
Build R with MKL and ICC
...> $ sudo make install
> $ R --version
> R version 3.2.2 (2015-08-14) -- "Fire Safety"
That is exactly the right combo: with-blas="-lmkl_rt -lpthread"
Nothing more for $MKL
now
$ ldd bin/exec/R
linux-vdso.so.1 (0x00007ffe305f9000)
libmkl_rt.so => /opt/intel/mkl/lib/intel64_lin/libmkl_rt.so (0x00007f216c9e3000)
.................................
Thank you
> If you have 'ifort' available, you would probably want to add it to
> the list of environment variables.
>
> --nate
>
> ______________________________________________
> R-devel at...
2020 Jul 11
0
Compilation error for R 4.0.2
...guess you should do is
/path/to/configure CPPFLAGS="-I${PCRE2DIR}/include ......"
make
Hth
-k
> setenv CXXFLAGS " ${CFLAGS} "
> setenv FFLAGS " ${CFLAGS} "
> setenv FCFLAGS " ${CFLAGS} "
> setenv LDFLAGS " -Wl,-rpath=${MKLROOT}/lib/intel64_lin
> -L${MKLROOT}/lib/intel64_lin -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core
> -Wl,-rpath=/uufs/
> chpc.utah.edu/sys/installdir/intel/compilers_and_libraries_2019.5.281/linux/compiler/lib/intel64_lin
> -L/uufs/
> chpc.utah.edu/sys/install...
2019 Jan 28
8
nlminb with constraints failing on some platforms
...S 'solves' the problem.
> sessionInfo()
R version 3.5.2 (2018-12-20)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Scientific Linux release 6.4 (Carbon)
Matrix products: default
BLAS/LAPACK: /zdata/groups/nfsopt/intel/2018update3/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/libmkl_gf_lp64.so
locale:
[1] C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
loaded via a namespace (and not attached):
[1] compiler_3.5.2
[[alternative HTML version deleted]]
2019 Feb 01
1
nlminb with constraints failing on some platforms
...)
>> R version 3.5.2 (2018-12-20)
>> Platform: x86_64-pc-linux-gnu (64-bit)
>> Running under: Scientific Linux release 6.4 (Carbon)
>
>> Matrix products: default
>> BLAS/LAPACK: /zdata/groups/nfsopt/intel/2018update3/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/libmkl_gf_lp64.so
>
>> locale:
>> [1] C
>
>> attached base packages:
>> [1] stats graphics grDevices utils datasets methods base
>
>> loaded via a namespace (and not attached):
>> [1] compiler_3.5.2
>
> So you us Intel's MKL lib...
2019 Feb 01
3
nlminb with constraints failing on some platforms
....2 (2018-12-20)
> > Platform: x86_64-pc-linux-gnu (64-bit)
> > Running under: Scientific Linux release 6.4 (Carbon)
>
> > Matrix products: default
> > BLAS/LAPACK: /zdata/groups/nfsopt/intel/2018update3/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/libmkl_gf_lp64.so
>
> > locale:
> > [1] C
>
> > attached base packages:
> > [1] stats graphics grDevices utils datasets methods base
>
> > loaded via a namespace (and not attached):
> > [1] compiler_3.5.2
>...
2019 Jan 31
1
nlminb with constraints failing on some platforms
...version 3.5.2 (2018-12-20)
> > Platform: x86_64-pc-linux-gnu (64-bit)
> > Running under: Scientific Linux release 6.4 (Carbon)
> >
> > Matrix products: default
> > BLAS/LAPACK:
> /zdata/groups/nfsopt/intel/2018update3/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/libmkl_gf_lp64.so
> >
> > locale:
> > [1] C
> >
> > attached base packages:
> > [1] stats graphics grDevices utils datasets methods base
> >
> > loaded via a namespace (and not attached):
> > [1] compiler_3.5.2
> >
> >
&g...
2015 Sep 29
0
Build R with MKL and ICC
...t;> R version 3.2.2 (2015-08-14) -- "Fire Safety"
>
>
> That is exactly the right combo: with-blas="-lmkl_rt -lpthread"
> Nothing more for $MKL
>
> now
> $ ldd bin/exec/R
> linux-vdso.so.1 (0x00007ffe305f9000)
> libmkl_rt.so => /opt/intel/mkl/lib/intel64_lin/libmkl_rt.so (0x00007f216c9e3000)
> .................................
2019 Jan 31
0
nlminb with constraints failing on some platforms
...gt;> sessionInfo()
> R version 3.5.2 (2018-12-20)
> Platform: x86_64-pc-linux-gnu (64-bit)
> Running under: Scientific Linux release 6.4 (Carbon)
>
> Matrix products: default
> BLAS/LAPACK: /zdata/groups/nfsopt/intel/2018update3/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/libmkl_gf_lp64.so
>
> locale:
> [1] C
>
> attached base packages:
> [1] stats graphics grDevices utils datasets methods base
>
> loaded via a namespace (and not attached):
> [1] compiler_3.5.2
>
>
>
> [[alternative HTML version deleted]]
>...
2019 Feb 01
0
nlminb with constraints failing on some platforms
...Info()
> R version 3.5.2 (2018-12-20)
> Platform: x86_64-pc-linux-gnu (64-bit)
> Running under: Scientific Linux release 6.4 (Carbon)
> Matrix products: default
> BLAS/LAPACK: /zdata/groups/nfsopt/intel/2018update3/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/libmkl_gf_lp64.so
> locale:
> [1] C
> attached base packages:
> [1] stats graphics grDevices utils datasets methods base
> loaded via a namespace (and not attached):
> [1] compiler_3.5.2
So you us Intel's MKL library for BLAS/LAPACK .....
2019 Feb 01
0
nlminb with constraints failing on some platforms
...; > Platform: x86_64-pc-linux-gnu (64-bit)
> > > Running under: Scientific Linux release 6.4 (Carbon)
> >
> > > Matrix products: default
> > > BLAS/LAPACK: /zdata/groups/nfsopt/intel/2018update3/compilers_and_libraries_2018.3.222/linux/mkl/lib/intel64_lin/libmkl_gf_lp64.so
> >
> > > locale:
> > > [1] C
> >
> > > attached base packages:
> > > [1] stats graphics grDevices utils datasets methods base
> >
> > > loaded via a namespace (and not attached):
&...
2015 Sep 07
2
Build R with MKL and ICC
On Sat, 2015-09-05 at 11:53 +0200, arnaud gaboury wrote:
> On Fri, Sep 4, 2015 at 5:58 PM, Martyn Plummer <plummerm at iarc.fr> wrote:
> > On Wed, 2015-09-02 at 20:49 +0200, arnaud gaboury wrote:
> >> On Wed, Sep 2, 2015 at 7:35 PM, arnaud gaboury <arnaud.gaboury at gmail.com> wrote:
> >> > After a few days of reading and headache, I finally gave a try at