Displaying 2 results from an estimated 2 matches for "install_deps".
2018 Sep 18
2
Suggested Patch: Adding commas to list of packages after R CMD check
Dear R-devs,
Scenario:
When checking a package via `R CMD check package_tar.ball`, required / suggested packages may be missing. R subsequently returns a list of packages that are missing (delimited by spaces).
Example:
```
R CMD check glmSparseNet_0.99.13.tar.gz
* using log directory '/home/ubuntu/Bioconductor/glmSparseNet.Rcheck'
* using R Under development (unstable) (2018-06-06
2018 Sep 18
0
Suggested Patch: Adding commas to list of packages after R CMD check
...and paste this list.
> This would be especially helpful when the list of missing dependencies is extensive.
This seems like a reasonable suggestion, considering how easy it is to do.
Another suggestion would be to (optionally) automatically install
missing dependencies. I think the devtools::install_deps function will
do that. (I don't use it, I have a homebrewed function for that purpose.)
Duncan Murdoch
>
>
> Example output:
>
> ```
> R CMD check glmSparseNet_0.99.13.tar.gz
> * using log directory '/home/ubuntu/Bioconductor/glmSparseNet.Rcheck'
> * usin...