Displaying 2 results from an estimated 2 matches for "initialcurateddf".
2012 Feb 28
1
Error in read.table(file = file, header = header, sep = sep, quote = quote, : more columns than column names
...you can provide. Here is my code:
rm(list=ls())
source("../../functions.R")
uncurated <- read.csv("../uncurated/GSE3141_full_pdata.csv", as.is
=TRUE,row.names=1)
celfile.dir <- "../../../DATA/GSE3141/RAW"
##initial creation of curated dataframe
curated <- initialCuratedDF(rownames(uncurated),
template.filename="template.csv")
The error occurs when I run this line:
> curated <- initialCuratedDF(rownames(uncurated),
template.filename="template.csv")
Error in read.table(file = file, header = header, sep = sep, quote = quote,
:
more column...
2011 Jun 02
2
Matrix Question
...2 1
0 0
1 0
0 3
As it currently stands, my code is the following:
rm(list=ls())
source("../../functions.R")
uncurated <- read.csv("../uncurated/Sample_Input_File_full_pdata.csv",as.is
=TRUE,row.names=1)
##initial creation of curated dataframe
curated <-
initialCuratedDF(rownames(uncurated),template.filename="Sample_Template_File.csv")
##--------------------
##start the mappings
##--------------------
##title -> alt_sample_name
curated$alt_sample_name <- uncurated$title
#T
tmp <- uncurated$characteristics_ch1.3
tmp <- *??????*
curated$T &l...