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2012 Aug 15
0
color-coding of biplot points for varimax rotated factors (from PCA)
...at NC State University. However, when you compare the two biplots, the observed points are not in the same location. The variable vectors match up, but not the points. I'm not sure why. The code is below. Please help. label=data[,"Urban.Rural"] indexU<-which(label=="U") indexR<-which(label=="R") collab<-rep(0,length(data[,1])) collab[indexU]<-"Blue" collab[indexR]<-"Green" library(psych) fit <- principal(mydata, nfactors = num.fac, rotate="varimax", scores = TRUE) z1 <- sum(fit2$loadings[,1]^2) ### need to sc...
2011 Oct 12
2
p adjustment on 4thcorner results
Hi all, This is probably a very simple question but I cannot figure out how to do it. I run the fourthcorner method with my data and would like to adjust the p values for multiple comparisons using Holm correction. When I run the fourthcorner I obtain the results in yellow. What do I need to do to be able to aply the Holm correction to those p values? > library(ade4) > four1 <-