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2008 Apr 13
1
Installing R in Ubuntu
...e things by myself, hence, this email. Based on the former exchange I read, I am trying to include enough information to see if somebody can help me. In advance, many thanks! ****************************************************************** This what I added to my list: deb http://rh-mirror.linux.iastate.edu/CRAN/bin/linux/ubuntu dapper/ ****************************************************************** nvilloria@nvilloria-desktop:~$ sudo apt-get update Get:1 http://rh-mirror.linux.iastate.edu dapper/ Release.gpg [189B] Hit http://rh-mirror.linux.iastate.edu dapper/ Release Ign http://rh-mirror.li...
2006 Dec 13
2
install.packages
I try to type this in my R-winEdt. but I got these. Do you know? Aimin > install.packages('http://rh-mirror.linux.iastate.edu/CRAN/bin/windows/contrib/2.4/plotrix_2.1-6.zip') Warning in download.packages(pkgs, destdir = tmpd, available = available, : no package 'http://rh-mirror.linux.iastate.edu/CRAN/bin/windows/contrib/2.4/plotrix_2.1-6.zip' at the repositories
2006 Dec 08
1
please help me for svm plot question
I run the following code, all other is ok, but plot(m.svm,p5.new,As~Cur) is not ok Anyone know why? install.packages("e1071") library(e1071) library(MASS) p5 <- read.csv("http://www.public.iastate.edu/~aiminy/data/p_5_2.csv") p5.new<-subset(p5,select=-Ms) p5.new$Y<-factor(p5.new$Y) levels(p5.new$Y) <- list(Out=c(1), In=c(0)) attach(p5.new) m.svm<-svm(Y~P+Aa+As+Cur,data=p5.new) summary(m.svm) plot(m.svm,p5.new,As~Cur) Here is output: > install.packages("e1071"...
2006 Dec 07
1
svm plot question
I run the following code, all other is ok, but plot(m.svm,p5.new,As~Cur) is not ok Anyone know why? install.packages("e1071") library(e1071) library(MASS) p5 <- read.csv("http://www.public.iastate.edu/~aiminy/data/p_5_2.csv") p5.new<-subset(p5,select=-Ms) p5.new$Y<-factor(p5.new$Y) levels(p5.new$Y) <- list(Out=c(1), In=c(0)) attach(p5.new) m.svm<-svm(Y~P+Aa+As+Cur,data=p5.new) summary(m.svm) plot(m.svm,p5.new,As~Cur) Here is output: > install.packages("e1071"...
2001 Dec 06
4
workgroups not recognized in virtual server conf files
...d. --Joe (If anyone is wondering why I bother with the 'netbios alias' line for just one netbios name, I tried this with three netbios aliases, expecting it to Just Work. This is a simplified example. If we can get this to work, I'll work my way back up ;-) $uname -a Linux xxx.xxx.iastate.edu 2.2.19-7.0.1 #1 Tue Apr 10 00:55:03 EDT 2001 i686 unknown # rpm -q samba samba-2.2.2-20011013 # cat smb.conf # Global parameters [global] workgroup = testwg netbios aliases = test4 include = /etc/samba/conf.%L # cat conf.test4 [global] workgroup = TES...
2007 May 04
2
mount.cifs and sec=krb5
...ello fellow Samba folks, I am attempting to mount a cifs share on a RHEL 5 box using mount.cifs. The server is another RHEL 5 box. Both boxes are joined to the same Kerberos realm (AD). I kinit to get my Kerberos tickets. This is the mount command I'm using: mount.cifs //rhel5.server.iastate.edu/benvon ./mnt -o user=benvon,sec=krb5 This results in a password prompt, then a permission denied message (even if the password was correct). The interesting thing to see is the log on the server (log level 10 excerpt): [2007/05/04 15:10:30, 3] smbd/sesssetup.c:reply_sesssetup_and_X(101...
2008 Jul 24
3
Integrating R and Textmate
...e Textmate. Problem 1: Textmate doesn't seem to recognize the packages that are already installed on R. Problem 2: When I execute the following command: install.packages("ade4", repos="http://cran.r-project.org", contriburl = contrib.url( "http://streaming.stat.iastate.edu/CRAN/", type="MacBinary"), dependencies=TRUE, installWithVers=TRUE) I download the package, but it is for R version 2.6 rather than the current version 2.7.1. Is there anyway to either point R in the right direction for the packages or have R install the correct version o...
2007 Feb 02
1
CGIwithR
I try a example http://omega.psi.iastate.edu/bootstrapFile.html it doesn't give me output. I don't why. For another example http://omega.psi.iastate.edu/trivial.html it seems works except it doesn't display figure. Does anyone know how to figure it out? Aimin
2015 Jun 13
3
Cannot install R on Ubuntu 14.04 LTS
...trying to install base R on my Ubuntu 14.04 LTS machine. I even just wiped my entire computer and reinstalled the operating system thinking that was the problem (since some people have problems updating R). So far I've tried to follow this link exactly that has instructions: http://mirror.las.iastate.edu/CRAN/ Since I just reinstalled Ubuntu I figured I would have no problems. I was just wondering if anyone else has had this happen to them. I was getting an error while doing sudo apt-get update that said: ....public key not available iastate... NO_PUBKEY 51716619E084DAB9 So I followed that l...
2002 Aug 26
2
Homedrive mapping
...t passwords sent to downlevel servers ) truly the issue? Is there any way to re-enable this functionality with more modern (2.2.x) versions of samba? Thanks, Ben Vaughan Ben Vaughan Systems Engineer, Engineering Computing Support Services 210 Marston 515 294-1629, Iowa State University benvon@iastate.edu pageben@iastate.edu
2009 Jul 16
1
error for installation
...;fields". when I load workspace again, then do installation again. I get the following error. I read R for Windows FAQ (4.8 see below), but I still can't figure it out. Does anyone can help me out? Thanks, jlm > install.packages("fields",repos="http://streaming.stat.iastate.edu/CRAN/ ",); trying URL ' http://streaming.stat.iastate.edu/CRAN/bin/windows/contrib/2.9/fields_5.02.zip ' Content type 'application/zip' length 4200608 bytes (4.0 Mb) opened URL downloaded 4.0 Mb package 'fields' successfully unpacked and MD5 sums checked Warning: c...
2000 May 15
0
OpenSSH (1.2.3) sshd hanging when using rsync over ssh (retry)
Now that the list is said to be open again, I'm resending this. I've merged my changes into OpenSSH 2.1.0 as Kris imported it into FreeBSD over the weekend. ---------- Forwarded message ---------- Date: Thu, 4 May 2000 08:40:22 -0500 (CDT) From: Guy Helmer <ghelmer at cs.iastate.edu> To: openssh-unix-dev at mindrot.org Subject: OpenSSH (1.2.3) sshd hanging when using rsync over ssh I have debugged a problem with OpenSSH's sshd (as found in FreeBSD, based on OpenSSH 1.2.3) that has been bugging me ever since I switched from ssh-1.2.27. I use rsync (FreeBSD port por...
2009 Mar 09
2
Cannot update 2.8.1 packages: unable to access index for repository...
...ding RODBC, rpart, RGraphViz, ggplot2 and their dependents. (b) From within Rgui, run update.packages(ask='graphics') I tried this several times with different repositories and mirrors and each time got messages like: Warning: unable to access index for repository http://streaming.stat.iastate.edu/CRAN/bin/windows/contrib/2.8 Warning: unable to access index for repository http://www.stats.ox.ac.uk/pub/RWin/bin/windows/contrib/2. Warning: unable to access index for repository http://www.omegahat.org/R/bin/windows/contrib/2.8 Warning: unable to access index for repository http://cran.fhcrc...
2010 Mar 11
1
parse an HTML page with verbose error message (using XML)
I'm using the function htmlParse() in the XML package, and I need a little bit help on error handling while parsing an HTML page. So far I can use either the default way: # error = xmlErrorCumulator(), by default library(XML) doc = htmlParse("http://www.public.iastate.edu/~pdixon/stat500/") # the error message is: # htmlParseStartTag: invalid element name or the tryCatch() approach: # error = NULL, errors to be caught by tryCatch() tryCatch({ doc = htmlParse("http://www.public.iastate.edu/~pdixon/stat500/", error = NULL) }, XMLError...
2011 Jan 24
2
Setting bioconductor repository in .Rprofile. Is there a permanent way?
I currently set the Bioconductor repository in my .Rprofile using this code (which needs editing for every version number change of Bioconductor): # Choose repositories repos <- structure(c(CRAN="http://streaming.stat.iastate.edu/CRAN", CRANextra="http://www.stats.ox.ac.uk/pub/RWin", BioCsoft="http://www.bioconductor.org/packages/2.7/bioc", Rforge="http://r-forge.r-project.org")) options(repos=repos) rm(repos) I'd like...
2006 Nov 26
1
plot p(Y=1) vs as
I am trying to fit a logistic regression model for this data set. Firstly, I want to plot P(Y=1) vs As and P(Y=1) vs Aa. Does any body know how to do these in R. Thanks, Aimin > p5 <- read.csv("http://www.public.iastate.edu/~aiminy/data/p_5_2.csv") > str(p5) 'data.frame': 1030 obs. of 6 variables: $ P : Factor w/ 5 levels "821p","8ABP",..: 1 1 1 1 1 1 1 1 1 1 ... $ Aa : Factor w/ 19 levels "ALA","ARG","ASN",..: 12 16 7 18 11 10 19 19 19 1...
2012 Mar 19
1
car/MANOVA question
Dear colleagues, I had a question wrt the car package. How do I evaluate whether a simpler multivariate regression model is adequate? For instance, I do the following: ami <- read.table(file = "http://www.public.iastate.edu/~maitra/stat501/datasets/amitriptyline.dat", col.names=c("TCAD", "drug", "gender", "antidepressant","PR", "dBP", "QRS")) ami$gender <- as.factor(ami$gender) ami$TCAD <- ami$TCAD/1000 ami$drug <- ami$drug/1000...
2007 Mar 09
1
useR! 2007 --- Call for papers and posters
...g. There will also be the opportunity to present your work as a poster instead of a paper. Poster submissions will be in the form of an abstract and needs to be submitted by June 30. Submit full papers, and poster abstracts, to submissions at user2007.org. useR! Program Committee user2007 at iastate.edu _______________________________________________ R-announce at stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-announce
2007 Mar 09
1
useR! 2007 --- Call for papers and posters
...g. There will also be the opportunity to present your work as a poster instead of a paper. Poster submissions will be in the form of an abstract and needs to be submitted by June 30. Submit full papers, and poster abstracts, to submissions at user2007.org. useR! Program Committee user2007 at iastate.edu _______________________________________________ R-announce at stat.math.ethz.ch mailing list https://stat.ethz.ch/mailman/listinfo/r-announce
2012 Dec 12
2
Problem installing package "caret"
Folks: I keep getting the following error message (I'm on Windows 7, R-2.15.2, and tried a reboot...). Thx! John > install.packages("caret")Installing package(s) into ‘C:/Program Files/R/R-2.15.2/library’ (as ‘lib’ is unspecified)trying URL 'http://streaming.stat.iastate.edu/CRAN/bin/windows/contrib/2.15/caret_5.15-045.zip'Content type 'application/zip' length 3478831 bytes (3.3 Mb)opened URLdownloaded 3.3 Mb package ‘caret’ successfully unpacked and MD5 sums checked Warning in install.packages : unable to move temporary installation ‘C:\Program Files...