search for: hu6800

...rows of tab-delimited fields in the order Probe set identifier Probe set description Array 1 expression Array 1 call Array 2 expression Array 2 call ... plus an extra tab (which I think is due to a programming glich). There are 7130 rows, including the column headers, for results from Affymetrix Hu6800 chips. When I read this file using read.table(filename, sep = "\t", head = TRUE) I got only 3720 rows. Furthermore count.fields(filename, sep = "\t") gave a result of length 7130 but several of the rows were reported as having only two fields instead of 15 like the other rows...

...ckage: Biobase Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()'. To cite Bioconductor, see 'citation("Biobase")' and for packages 'citation(pkgname)'. Loading required package: DBI Loading required package: hu6800.db Loading required package: AnnotationDbi Loading required package: org.Hs.eg.db determining 1000 random DLD-scores with 20 probe sets each (wait for 10 dots) .......... epstopdf splitSet.eps pdflatex tr_2005_02 This is pdfTeX, Version 3.1415926-1.40.9 (MiKTeX 2.7) entering extended mode (t...

I have recently upgraded to Ubuntu Gutsy and, for the first time, am using a 64-bit installation. After failing miserably to install R from source, not a problem for me in the past with a 32-bit install, I went the route of using the Debian Etch build. This went smoothly, but I am unable to update my numerous R and BioConductor packages, getting non-zero exit status errors on each package. Is