search for: homo

> chromosomes id refseq name length 1 0 NC_000001.9 Homo sapiens chromosome 1 247249719 2 1 NC_000002.10 Homo sapiens chromosome 2 242951149 3 2 NC_000003.10 Homo sapiens chromosome 3 199501827 4 3 NC_000004.10 Homo sapiens chromosome 4 191273063 5 4 NC_000005.8 Homo sapiens chromosome 5 180857866 6 5 NC_000006.10 Homo sapiens chromosome...

Through converting a miRNAs file from FASTA to character format I get a vector which looks like the following: > nml [1] "hsa-let-7a MIMAT0000062 Homo sapiens let-7a" [2] "hsa-let-7b MIMAT0000063 Homo sapiens let-7b" [3] "hsa-let-7c MIMAT0000064 Homo sapiens let-7c" [4] "hsa-let-7d MIMAT0000065 Homo sapiens let-7d" [5] "hsa-let-7e MIMAT0000066 Homo sap...

I have the following vector of strings (shown only the first 3 elements) > desc[1:3] [1] "hsa-let-7a MIMAT0000062 Homo sapiens let-7a" [2] "hsa-let-7a* MIMAT0004481 Homo sapiens let-7a*" [3] "hsa-let-7a-2* MIMAT0010195 Homo sapiens let-7a-2*" > is.vector(desc) [1] TRUE > A <- unlist(strsplit(desc[1:3], " ")) > A [1] "hsa-let-7a MIMAT0000062 Homo sapien...

...ugh less significant question is how I can get the panels to be in the order of the chromosomes as listed in the chromosomes table rather than alphabetical order of their names. thanks Dan > chromosomes chromosome refSeq name length 1 0 NC_000001.9 Homo sapiens chromosome 1 247249719 2 1 NC_000002.10 Homo sapiens chromosome 2 242951149 3 2 NC_000003.10 Homo sapiens chromosome 3 199501827 4 3 NC_000004.10 Homo sapiens chromosome 4 191273063 5 4 NC_000005.8 Homo sapiens chromosome 5 180857866 6...

Dear All, I need to fetch GO ontologies for Homo sapiens with their mappings to corresponding Uniprot identifiers. I would be using this information to compare result from a clustering algorithm with existing protein complexes. This would be a test to check how the clustering algorithm accurately captures GO terms with respect to the known protei...

...o problem... And users can login into the domain and access their folders/printers, BUT!!! Every now and then they cannot log in getting error message that domain controller cannot be found.... I'm trying to track the problem down :-) When I went thru the DIAGNOSIS.TXT, test #5 fails: [root@homo bin]# ./nmblookup -B CMP0094 '*' querying * on 0.0.0.0 10.10.8.4 *<00> [root@homo]# (Server name is "homo", client is "CMP0094", the servers IP is 10.10.8.4, the clients ip is 10.10.8.79) Shouldn't the above lookup answer with the clients ip? I have 2 Win200...

Hello R-user community! I am running R 2.7.0 on a Power Book (Tiger). (I am still R and statistics beginner) I did the following : pdf("InLnegthMaxHomogeneity.pdf") boxplot(inflorescence_length_Max~Sex, main="Bartletts Homogeneity for inflorescence length",data=FemMal_Sex) Homo<-bartlett.test(FemMal_Sex$inflorescence_length_Max,FemMal_Sex$Sex) text( 2, 500, "Bartlett's K-squared=", col='red',adj = c(1,0) )...

Hi ALL, I have very simple question regarding pattern matching. Could anyone tell me how to I can use R to retrieve string pattern from text file. for example my file contain following information SpeciesCommon=(Human);SpeciesScientific=(Homo sapiens);ReactiveCentres=(N,C,C,C,+ H,O,C,C,C,C,O,H);BondInvolved=(C-H);EzCatDBID=(S00343);BondFormed=(O-H,O-H);Bond+ 255B);Cofactors=(Cu(II),CU,501,A,Cu(II),CU,502,A);CatalyticSwissProt=(P25006);Sp+ eciesScientific=(Achromobacter cycloclastes);SpeciesCommon=(Bacteria);ReactiveCe+ and I want to ex...

...o problem... And users can login into the domain and access their folders/printers, BUT!!! Every now and then they cannot log in getting error message that domain controller cannot be found.... I'm trying to track the problem down :-) When I went thru the DIAGNOSIS.TXT, test #5 fails: [root@homo bin]# ./nmblookup -B CMP0094 '*' querying * on 0.0.0.0 10.10.8.4 *<00> [root@homo]# (Server name is "homo", client is "CMP0094", the servers IP is 10.10.8.4, the clients ip is 10.10.8.79) Shouldn't the above lookup answer with the clients ip? I have 2 Win200...

...sienet ja muut eliöt pyynikki 2 Petteri kasvit, sienet ja muut eliöt harmaaleppä 5 Lauri kasvit, sienet ja muut eliöt lumipuu 9 Teemu linnut kainostelua 1 Petteri linnut viileä harakka 2 Lauri linnut hipö 3 Teemu linnut pinnalla 5 Lassi linnut elämän viiva 7 Lassi nisäkkäät pedot 1 Teemu nisäkkäät Homo sapiens angelus 3 Hate nisäkkäät madekoukkujen suojelupyhimys 3 Lassi nisäkkäät portsan kundi 3 Hannu nisäkkäät maukasta marmeladia 8 Teemu reissut puikot 1 Lassi reissut ajatelkaa, jos Häntä ei olisikaan 2 Lauri reissut kökar 3 Hate reissut matka aikaan joka ei enää palaa 3 Hannu reissut skrinnare...

...ccessed through Bioconductor packages. Unluckily some useful data is stored in databases like, for instance, miRDB, miRecords, etc ... which offer just an interactive HTML interface. See for instance http://mirdb.org/cgi-bin/search.cgi, http://mirecords.umn.edu/miRecords/interactions.php?species=Homo+sapiens&mirna_acc=Any&targetgene_type=refseq_acc&targetgene_info=&v=yes&search_int=Search Downloading data manually from the web pages is a painstaking time-consumung and error-prone activity. I came across a Python script that downloads (dumps) whole web pages into a text fil...

...ynikki 2 Hate vailla armeerausta 2 Lassi ajatelkaa, jos Häntä ei olisikaan 2 Lassi elämän viiva 7 Lassi pedot 1 Lassi portsan kundi 3 Lauri hipö 3 Lauri jääpuut 5 Lauri kökar 3 Lauri lumipuu 9 Petteri harmaaleppä 5 Petteri viileä harakka 2 Teemu harppi 2 Teemu Homo sapiens angelus 3 Teemu kainostelua 1 Teemu pinnalla 5 Teemu portinvartija 6 Teemu puikot 1 Teemu verkkovaja 3 I have done this: pisteet.hannu <- subset(pisteet.sum, kuvaaja == "Hannu", select=c(kuva, yhteispisteet)) (pisteet.hannu <- pisteet.hannu[rev(order(p...

I have 3 variables relating to the successful introductions of species to 95 different areas: introduction frequency; number of successes pre 1906; number of successes post 1906 The data are not normal, nor homo-skedatic, so I am using non-parametric statistics. I have calculated Kendall's tau between both introduction & successes pre 1906 (tau=0.3903) and introduction & successes post 1906 (tau=0.3317)- pre + post values are independent. Is it possible to test whether there is a significant...

...> > How about "religion or lack thereof"? I know it can be understood to > be implicit, but as an atheist I tend feel a bit left out of > statements like that. +1!!!! Well, since we're being picky... :D race: last time I checked, we're all members of the same race, homo sapiens sapiens. national origin vs. immigration status: the former is already covered by "culture" for everything that matters, the latter is very specific to one culture. social "class": this is too Marxist*, we should use "social status", since everything is blurred...

...kstations (W2kSP4) couln't log into the domain. I removed the machines from the domain, changed the name, created a new machine-account, but I still can't add the machine to the domain. smbclient -L localhost Enter root's password: Anonymous login successful Domain=[DCHOMO] OS=[Unix] Server=[Samba 3.2.11-0.28] S.O.=Red Hat Enterprise Linux Server (2.6.18-164.6.1.el5) Sharename Type Comment --------- ---- ------- netlogon Disk Network Logon Service public Disk Public Stuff IPC$...

...FORMAT NA00001") be separated by tab : ##fileformat=VCFv4.1 ##fileDate=20090805 ##source=myImputationProgramV3.1 ##reference=file:///seq/references/1000GenomesPilot-NCBI36.fasta ##contig=<ID=20,length=62435964,assembly=B36,md5=f126cdf8a6e0c7f379d618ff66beb2da,species="Homo sapiens",taxonomy=x> ##phasing=partial ##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of Samples With Data"> ##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth"> ##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency"&...

...oes IPX need to be enabled in some other way (eth0 has a primary IPX interface attached and is up and running, so that should be fine). Did anyone else manage to get this running? Any tips would be appreciated.. Yours, Florian P.S. I also tried Cedega (Winex 4.0), but no IPX there, either. - -- Homo homini lupus. -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.2.4 (GNU/Linux) iD8DBQFBbmdt7CzyshGvatgRAv8mAJ4nzJksZmbAF40r/fVTtpIQaR9hJQCg1PMX F6ucJXXlMVRPsuFg97e0ogQ= =K+lR -----END PGP SIGNATURE-----

...ues using multiple imputation. For achieving this goal, the methodology consists in three steps: 1. missing data imputation using tailored imputation models: four multiple imputation methods are proposed, two are based on joint modelling (JM-GL and JM-DP) and two are fully sequential methods (FCS-homo and FCS-hetero). 2. cluster analysis of imputed data sets: six clustering methods are available (kmeans, pam, clara, hierarchical clustering, fuzzy c-means and gaussian mixture), but custom methods can also be easily used. 3. partition pooling: the set of partitions is aggregated using NMF based me...

...ues using multiple imputation. For achieving this goal, the methodology consists in three steps: 1. missing data imputation using tailored imputation models: four multiple imputation methods are proposed, two are based on joint modelling (JM-GL and JM-DP) and two are fully sequential methods (FCS-homo and FCS-hetero). 2. cluster analysis of imputed data sets: six clustering methods are available (kmeans, pam, clara, hierarchical clustering, fuzzy c-means and gaussian mixture), but custom methods can also be easily used. 3. partition pooling: the set of partitions is aggregated using NMF based me...

If anyone is still interested, this is what worked for me. Code: env WINEPREFIX="/home/shemz/.wine" wine "C:\G03W\gview.exe" It works like a charm for usual works. But some eye candy doesn't work like HOMO LUMO projections. I am still trying to work that out as this peice of software is a relative old one (I have 03W version) and should be better supported on Wine.